G133316


Basic Information

Item Value
gene id G133316
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 10314285 ~ 10314489 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU151578
GCCGGCTGGGTGGACATTGACCACGGCTGCTAAGGATAAACTCCCACTCGACAGCAGAAGGACAAACACGTTCTATTTTTCTTGGTTAGATTTAAACACTGTGTATTATGCTTCTTGCGTTAATGATTGAAAACATGAGCTCTCTTGGTCCTCTCTGAGGTTGACCAGTACTGAAAAGTACACACAGAAAGTCACACTTCCAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151578 True 205 lncRNA 0.45 1 10314285 10314489

Neighbor

gene id symbol gene type direction distance location
CI01000026_10265012_10268157 NA coding upstream 45737 10264945 ~ 10268548 (+)
CI01000026_10200749_10202405 NA coding upstream 111771 10198593 ~ 10202514 (+)
CI01000026_10136110_10149386 BRD7 coding upstream 164819 10135996 ~ 10149466 (+)
CI01000026_10124232_10124468 NA coding upstream 188450 10123916 ~ 10125835 (+)
CI01000026_09915483_09917692 NA coding upstream 396366 9915445 ~ 9917919 (+)
CI01000026_10315650_10317985 NA coding downstream 590 10315079 ~ 10317990 (+)
CI01000026_10351923_10354175 CEBPG coding downstream 36914 10351403 ~ 10356695 (+)
CI01000026_10453245_10454111 NA coding downstream 138636 10453125 ~ 10454176 (+)
CI01000026_10455059_10456945 CNEP1R1, CNEP1R1.L, TM188 coding downstream 140570 10455059 ~ 10457563 (+)
CI01000026_10458602_10465979 GPATCH1 coding downstream 144113 10458602 ~ 10466513 (+)
G133313 NA non-coding upstream 5192 10308869 ~ 10309093 (+)
G133312 NA non-coding upstream 6059 10308015 ~ 10308226 (+)
G133310 NA non-coding upstream 7678 10306390 ~ 10306607 (+)
G133303 NA non-coding upstream 14901 10299176 ~ 10299384 (+)
G133286 NA non-coding upstream 34356 10279723 ~ 10279929 (+)
G133319 NA non-coding downstream 4005 10318494 ~ 10318772 (+)
G133320 NA non-coding downstream 6151 10320640 ~ 10320918 (+)
G133323 NA non-coding downstream 12168 10326657 ~ 10326856 (+)
G133324 NA non-coding downstream 13379 10327868 ~ 10328095 (+)
G133192 NA other upstream 152324 10159819 ~ 10161961 (+)
G132667 NA other upstream 745125 9568739 ~ 9569160 (+)
G131077 NA other upstream 1807498 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 2014871 8297857 ~ 8307629 (+)
G130967 NA other upstream 2125212 8188374 ~ 8189073 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 756279 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 930444 11241496 ~ 11246204 (+)
G133542 NA other downstream 1161628 11476117 ~ 11477544 (+)

Expression


Co-expression Network