G133330


Basic Information

Item Value
gene id G133330
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 10343711 ~ 10344066 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU151592
ATTTCTGGGCCTGCTGGCAGCTGGTGAAAGCACTGGACAGGGAGTTTTAAATCATATCGATACTGAAGGGATTTGTACTATACGAGAACCTCAAACTCAAAAGTGAGTACACGCATATCTCACTTCAAGGACAGAATCTGGAGTGTGGAGAGACCAAGACAAGTTTCTGCCTTTTTTGAGTTTCACTCAAAGGTCTGGTTAAACTTTTGTCAGAAGACAAATAAGAAAGAGTGTATTATCAAATAACGTGGTTAAACACACAGACTTGCATACTTATGCACACATATTCATTTGTATTGGATTTATCATATTGTTTGTTTTCACATACTTCTTTAGCAAATGATAAGATACTGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151592 True 356 lncRNA 0.37 1 10343711 10344066

Neighbor

gene id symbol gene type direction distance location
CI01000026_10315650_10317985 NA coding upstream 25721 10315079 ~ 10317990 (+)
CI01000026_10265012_10268157 NA coding upstream 75163 10264945 ~ 10268548 (+)
CI01000026_10200749_10202405 NA coding upstream 141197 10198593 ~ 10202514 (+)
CI01000026_10136110_10149386 BRD7 coding upstream 194245 10135996 ~ 10149466 (+)
CI01000026_10124232_10124468 NA coding upstream 217876 10123916 ~ 10125835 (+)
CI01000026_10351923_10354175 CEBPG coding downstream 7337 10351403 ~ 10356695 (+)
CI01000026_10453245_10454111 NA coding downstream 109059 10453125 ~ 10454176 (+)
CI01000026_10455059_10456945 CNEP1R1, CNEP1R1.L, TM188 coding downstream 110993 10455059 ~ 10457563 (+)
CI01000026_10458602_10465979 GPATCH1 coding downstream 114536 10458602 ~ 10466513 (+)
CI01000026_10468478_10482863 LRP3 coding downstream 124412 10468478 ~ 10482955 (+)
G133329 NA non-coding upstream 35 10343306 ~ 10343676 (+)
G133326 NA non-coding upstream 10910 10332594 ~ 10332801 (+)
G133324 NA non-coding upstream 15616 10327868 ~ 10328095 (+)
G133323 NA non-coding upstream 16855 10326657 ~ 10326856 (+)
G133320 NA non-coding upstream 22793 10320640 ~ 10320918 (+)
G133336 NA non-coding downstream 29332 10373398 ~ 10373955 (+)
G133338 NA non-coding downstream 37188 10381254 ~ 10381549 (+)
G133339 NA non-coding downstream 37488 10381554 ~ 10381758 (+)
G133344 NA non-coding downstream 42976 10387042 ~ 10387244 (+)
G133192 NA other upstream 181750 10159819 ~ 10161961 (+)
G132667 NA other upstream 774551 9568739 ~ 9569160 (+)
G131077 NA other upstream 1836924 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 2044297 8297857 ~ 8307629 (+)
G130967 NA other upstream 2154638 8188374 ~ 8189073 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 726702 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 900867 11241496 ~ 11246204 (+)
G133542 NA other downstream 1132051 11476117 ~ 11477544 (+)

Expression


Co-expression Network