Gene
RNA
| Item | Value |
|---|---|
| gene id | G133336 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 10373398 ~ 10373955 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU151598 | True | 558 | lncRNA | 0.41 | 1 | 10373398 | 10373955 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_10351923_10354175 | CEBPG | coding | upstream | 16703 | 10351403 ~ 10356695 (+) |
| CI01000026_10315650_10317985 | NA | coding | upstream | 55408 | 10315079 ~ 10317990 (+) |
| CI01000026_10265012_10268157 | NA | coding | upstream | 104850 | 10264945 ~ 10268548 (+) |
| CI01000026_10200749_10202405 | NA | coding | upstream | 170884 | 10198593 ~ 10202514 (+) |
| CI01000026_10136110_10149386 | BRD7 | coding | upstream | 223932 | 10135996 ~ 10149466 (+) |
| CI01000026_10453245_10454111 | NA | coding | downstream | 79170 | 10453125 ~ 10454176 (+) |
| CI01000026_10455059_10456945 | CNEP1R1, CNEP1R1.L, TM188 | coding | downstream | 81104 | 10455059 ~ 10457563 (+) |
| CI01000026_10458602_10465979 | GPATCH1 | coding | downstream | 84647 | 10458602 ~ 10466513 (+) |
| CI01000026_10468478_10482863 | LRP3 | coding | downstream | 94523 | 10468478 ~ 10482955 (+) |
| CI01000026_10521984_10543018 | RHPN2 | coding | downstream | 148029 | 10521984 ~ 10543108 (+) |
| G133330 | NA | non-coding | upstream | 29332 | 10343711 ~ 10344066 (+) |
| G133329 | NA | non-coding | upstream | 29722 | 10343306 ~ 10343676 (+) |
| G133326 | NA | non-coding | upstream | 40597 | 10332594 ~ 10332801 (+) |
| G133324 | NA | non-coding | upstream | 45303 | 10327868 ~ 10328095 (+) |
| G133338 | NA | non-coding | downstream | 7299 | 10381254 ~ 10381549 (+) |
| G133339 | NA | non-coding | downstream | 7599 | 10381554 ~ 10381758 (+) |
| G133344 | NA | non-coding | downstream | 13087 | 10387042 ~ 10387244 (+) |
| G133373 | NA | non-coding | downstream | 141465 | 10515420 ~ 10515648 (+) |
| G133383 | NA | non-coding | downstream | 179005 | 10552960 ~ 10628076 (+) |
| G133192 | NA | other | upstream | 211437 | 10159819 ~ 10161961 (+) |
| G132667 | NA | other | upstream | 804238 | 9568739 ~ 9569160 (+) |
| G131077 | NA | other | upstream | 1866611 | 8501408 ~ 8506787 (+) |
| CI01000026_08297901_08307596 | CTRB1 | other | upstream | 2073984 | 8297857 ~ 8307629 (+) |
| G130967 | NA | other | upstream | 2184325 | 8188374 ~ 8189073 (+) |
| CI01000026_11075931_11078249 | MDK, MDKA | other | downstream | 696813 | 11075784 ~ 11079080 (+) |
| CI01000026_11241496_11246081 | NA | other | downstream | 870978 | 11241496 ~ 11246204 (+) |
| G133542 | NA | other | downstream | 1102162 | 11476117 ~ 11477544 (+) |
