G133383


Basic Information

Item Value
gene id G133383
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 10552960 ~ 10628076 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU151646
CCTCAGAGAGTTCTTTGCCATGAGGTGCCATGTTGAACTTCCAGTGACCAGTATGAGAGAGTGAGAGCGATAACACCAAATTTAACACACCTGCTCCCCATTCACACCTGAGACCTTGTAACACTAACGAGTCACATGACACCGGGAAGAGAAAATGGCTAATTGGGCCCAATTTGGACATTTTTACTTAGGGGTGTACTCACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151646 True 204 lncRNA 0.46 2 10552960 10628076

Neighbor

gene id symbol gene type direction distance location
CI01000026_10521984_10543018 RHPN2 coding upstream 9852 10521984 ~ 10543108 (+)
CI01000026_10468478_10482863 LRP3 coding upstream 70005 10468478 ~ 10482955 (+)
CI01000026_10458602_10465979 GPATCH1 coding upstream 86447 10458602 ~ 10466513 (+)
CI01000026_10455059_10456945 CNEP1R1, CNEP1R1.L, TM188 coding upstream 95397 10455059 ~ 10457563 (+)
CI01000026_10453245_10454111 NA coding upstream 98784 10453125 ~ 10454176 (+)
CI01000026_10634025_10634327 NA coding downstream 5378 10633454 ~ 10635525 (+)
CI01000026_10640494_10646504 BAT1, SLC7A9 coding downstream 12418 10640494 ~ 10646840 (+)
CI01000026_10651216_10652913 NA coding downstream 21467 10649543 ~ 10653754 (+)
CI01000026_10655730_10656230 NA coding downstream 27121 10655197 ~ 10656735 (+)
CI01000026_10670565_10671520 NA coding downstream 41579 10669655 ~ 10671722 (+)
G133373 NA non-coding upstream 37312 10515420 ~ 10515648 (+)
G133344 NA non-coding upstream 165716 10387042 ~ 10387244 (+)
G133339 NA non-coding upstream 171202 10381554 ~ 10381758 (+)
G133338 NA non-coding upstream 171411 10381254 ~ 10381549 (+)
G133336 NA non-coding upstream 179005 10373398 ~ 10373955 (+)
G133406 NA non-coding downstream 156716 10784792 ~ 10785562 (+)
G133420 NA non-coding downstream 257977 10886053 ~ 10895159 (+)
G133426 NA non-coding downstream 279399 10907475 ~ 10907675 (+)
G133442 NA non-coding downstream 490635 11118711 ~ 11119022 (+)
G133443 NA non-coding downstream 491572 11119648 ~ 11119877 (+)
G133192 NA other upstream 390999 10159819 ~ 10161961 (+)
G132667 NA other upstream 983800 9568739 ~ 9569160 (+)
G131077 NA other upstream 2046173 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 2253546 8297857 ~ 8307629 (+)
G130967 NA other upstream 2363887 8188374 ~ 8189073 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 442692 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 616857 11241496 ~ 11246204 (+)
G133542 NA other downstream 848041 11476117 ~ 11477544 (+)

Expression


Co-expression Network