Gene
RNA
| Item | Value |
|---|---|
| gene id | G133943 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 11067826 ~ 11068302 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU152318 | True | 477 | lncRNA | 0.38 | 1 | 11067826 | 11068302 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_10872568_10886442 | NA | coding | downstream | 181384 | 10872346 ~ 10886442 (-) |
| CI01000026_10851071_10860344 | ATG13 | coding | downstream | 207482 | 10851071 ~ 10860344 (-) |
| CI01000026_10793317_10799991 | FBXO3 | coding | downstream | 266450 | 10791792 ~ 10801376 (-) |
| CI01000026_10788054_10788652 | CD59 | coding | downstream | 278117 | 10787339 ~ 10789709 (-) |
| CI01000026_10775368_10777914 | APLNR2 | coding | downstream | 288858 | 10775122 ~ 10778968 (-) |
| CI01000026_11074731_11075204 | NA | coding | upstream | 6284 | 11074586 ~ 11075207 (-) |
| CI01000026_11081510_11082996 | CHRM4, CHRM4A | coding | upstream | 12110 | 11080412 ~ 11082996 (-) |
| CI01000026_11123998_11200321 | AMBRA1A | coding | upstream | 55696 | 11123998 ~ 11200321 (-) |
| CI01000026_11215228_11222347 | SNX1B | coding | upstream | 146585 | 11214887 ~ 11222347 (-) |
| CI01000026_11226603_11231478 | SLC8B1 | coding | upstream | 158301 | 11226603 ~ 11231478 (-) |
| G133924 | NA | non-coding | downstream | 89581 | 10977632 ~ 10978245 (-) |
| G133923 | NA | non-coding | downstream | 92160 | 10975381 ~ 10975666 (-) |
| G133922 | NA | non-coding | downstream | 94469 | 10973027 ~ 10973357 (-) |
| G133921 | NA | non-coding | downstream | 96535 | 10970993 ~ 10971291 (-) |
| G133920 | NA | non-coding | downstream | 97999 | 10969337 ~ 10969827 (-) |
| G133944 | NA | non-coding | upstream | 1658 | 11069960 ~ 11070189 (-) |
| G133837 | NA | non-coding | upstream | 141543 | 11209845 ~ 11211577 (-) |
| G133981 | NA | non-coding | upstream | 168943 | 11237245 ~ 11240455 (-) |
| G133990 | NA | non-coding | upstream | 196782 | 11265084 ~ 11265312 (-) |
| G133802 | NA | non-coding | upstream | 233613 | 11301915 ~ 11307181 (-) |
| G133790 | NA | other | downstream | 230221 | 10834015 ~ 10859589 (-) |
| CI01000026_10347872_10351783 | CEBPA | other | downstream | 718869 | 10347746 ~ 10351783 (-) |
| G132721 | NA | other | downstream | 1517182 | 9550030 ~ 9550644 (-) |
| G132575 | NA | other | downstream | 1680110 | 9387151 ~ 9387716 (-) |
| G136110 | NA | other | upstream | 3486615 | 14554917 ~ 14555436 (-) |
| CI01000026_16756776_16760261 | RBPMS2A, RBPMS2B, RBPMS2 | other | upstream | 5688427 | 16756729 ~ 16761341 (-) |
| G137667 | NA | other | upstream | 5738062 | 16806364 ~ 16808372 (-) |
| G137914 | NA | other | upstream | 5914949 | 16983251 ~ 16984352 (-) |
