G133529


Basic Information

Item Value
gene id G133529
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 11347963 ~ 11348924 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU151814
TTTTAAAAGGATAGTTCAAATTAATAACAATAAAAAAAGACAATTCTGTCATCATTTACTCATCCTCGTGTTTTTTCACATCTGTATAAATACCTTGCTTGGTAAGCAGAATGAGAGTTCTCCATTCACTTTCATTATATGGAAAATAAAAAGATGCGTTTGTTCATGCAAAAATGAAAAATTCTGTCATCATTTACTCACCCTTATGTCATTCCAAATCCTTAAGACTTCGTTCATCTTTAGAACACAAATGAAGATATTTTTAATGAAATCTGAGAGATTTCTGTCCCTCCATAGCAATTTAACCACCACTTTCAAGGTCCAGAAAGGTACTAAAGACATCAATACTTTTTGTGCGCAAAAACAAAACAAAAATAACGACTTTATTCAACAATATCTTCTCTTCTGTGTCATTCTCATACGTTGTTTACGTTCAGCACTTCCAGGTTCTGCGTCAGAACGCCGACTCATTATTGGCCGGCTCCTGCGTCATCACGCATGCGTCGTGCTGCTCACGTGAACAAAGGTCTTATGGGTTTGGAACGACATGAGGGTGAGTAAATTATGACTGAATTGTTGTTTTTTGGGTGAACTAACCCTTTAACATCTGCCTAATATAGAACAATCTTGAACCCTATAGTGAAATTCAGAATAAAGTTCTGAATCTATATGCCAGCAGTGATGTGCACATAATCTGCAGCTGGATTTTTGTGAAACATGGAAAAGAGTGGACAGACAGAAGCCTTTCTCAGAAACAGAGCTGAAAGATCAATCAAAGTGAATAGAACAGATTTTAATGCAAATACAGTTGAGCTCAAAAGTTTACATACCCCTTGCAGAATCTCGAAAAATGTGAATCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151814 True 861 lncRNA 0.36 3 11347963 11348924

Neighbor

gene id symbol gene type direction distance location
CI01000026_11298219_11305000 NA coding upstream 42950 11298219 ~ 11305013 (+)
CI01000026_11266022_11278889 NA coding upstream 69064 11266022 ~ 11278899 (+)
CI01000026_11262923_11264188 TNNI2A.4, TNNI2B.2, TNNI2B.1 coding upstream 83429 11261081 ~ 11264534 (+)
CI01000026_11241496_11246081 NA coding upstream 101882 11241496 ~ 11246204 (+)
CI01000026_11239339_11240254 TNNI2A.4, TNNI2B.2, TNNI2B.1 coding upstream 107530 11239339 ~ 11240433 (+)
CI01000026_11403059_11415298 PTPN5 coding downstream 54135 11403059 ~ 11415512 (+)
CI01000026_11436071_11446054 KIAA0232 coding downstream 86577 11435501 ~ 11446322 (+)
CI01000026_11456632_11473446 TBC1D14 coding downstream 107708 11456632 ~ 11473653 (+)
CI01000026_11483300_11485455 TADA2B coding downstream 134376 11483300 ~ 11486080 (+)
CI01000026_11497016_11677778 SORCS2 coding downstream 148092 11497016 ~ 11677778 (+)
G133523 NA non-coding upstream 5475 11340639 ~ 11342488 (+)
G133522 NA non-coding upstream 11132 11335470 ~ 11336831 (+)
G133521 NA non-coding upstream 13860 11333873 ~ 11334103 (+)
G133520 NA non-coding upstream 14276 11333341 ~ 11333687 (+)
G133519 NA non-coding upstream 15688 11332066 ~ 11332275 (+)
G133530 NA non-coding downstream 388 11349312 ~ 11349606 (+)
G133528 NA non-coding downstream 5238 11354162 ~ 11354451 (+)
G133533 NA non-coding downstream 12892 11361816 ~ 11362227 (+)
G133512 NA non-coding downstream 19916 11368840 ~ 11369299 (+)
G133536 NA non-coding downstream 46120 11395044 ~ 11395244 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 268883 11075784 ~ 11079080 (+)
G133192 NA other upstream 1186002 10159819 ~ 10161961 (+)
G132667 NA other upstream 1778803 9568739 ~ 9569160 (+)
G131077 NA other upstream 2841176 8501408 ~ 8506787 (+)
G133542 NA other downstream 127193 11476117 ~ 11477544 (+)

Expression


Co-expression Network