G133536


Basic Information

Item Value
gene id G133536
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 11395044 ~ 11395244 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU151821
TTATTGCTGGCCCTCTTCTTGCAGGAGCCATTGAATGGACTGCCAAATGACAATCAGCAAACGGGGTACAGGTGTTTGCAATCAGCACTTGAAGAGCATCAGCATAGAAAGAAAACAGAGAGGGAAATAGCAAAAGCAGCAAACACATCACCGTGAACACATCACCAAACATAATGCACAAGAGAAAAAAACAATACGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151821 True 201 lncRNA 0.42 1 11395044 11395244

Neighbor

gene id symbol gene type direction distance location
CI01000026_11298219_11305000 NA coding upstream 90031 11298219 ~ 11305013 (+)
CI01000026_11266022_11278889 NA coding upstream 116145 11266022 ~ 11278899 (+)
CI01000026_11262923_11264188 TNNI2A.4, TNNI2B.2, TNNI2B.1 coding upstream 130510 11261081 ~ 11264534 (+)
CI01000026_11241496_11246081 NA coding upstream 148963 11241496 ~ 11246204 (+)
CI01000026_11239339_11240254 TNNI2A.4, TNNI2B.2, TNNI2B.1 coding upstream 154611 11239339 ~ 11240433 (+)
CI01000026_11403059_11415298 PTPN5 coding downstream 7815 11403059 ~ 11415512 (+)
CI01000026_11436071_11446054 KIAA0232 coding downstream 40257 11435501 ~ 11446322 (+)
CI01000026_11456632_11473446 TBC1D14 coding downstream 61388 11456632 ~ 11473653 (+)
CI01000026_11483300_11485455 TADA2B coding downstream 88056 11483300 ~ 11486080 (+)
CI01000026_11497016_11677778 SORCS2 coding downstream 101772 11497016 ~ 11677778 (+)
G133512 NA non-coding upstream 25745 11368840 ~ 11369299 (+)
G133533 NA non-coding upstream 32817 11361816 ~ 11362227 (+)
G133528 NA non-coding upstream 40593 11354162 ~ 11354451 (+)
G133530 NA non-coding upstream 45438 11349312 ~ 11349606 (+)
G133529 NA non-coding upstream 46120 11347963 ~ 11348924 (+)
G133542 NA non-coding downstream 80873 11476117 ~ 11477544 (+)
G133564 NA non-coding downstream 206958 11602202 ~ 11602886 (+)
G133572 NA non-coding downstream 263286 11658530 ~ 11659089 (+)
G133594 NA non-coding downstream 336567 11731811 ~ 11732814 (+)
G133596 NA non-coding downstream 338501 11733745 ~ 11734005 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 315964 11075784 ~ 11079080 (+)
G133192 NA other upstream 1233083 10159819 ~ 10161961 (+)
G132667 NA other upstream 1825884 9568739 ~ 9569160 (+)
G131077 NA other upstream 2888257 8501408 ~ 8506787 (+)

Expression


Co-expression Network