Gene
RNA
| Item | Value |
|---|---|
| gene id | G134000 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 11421357 ~ 11421556 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU152379 | True | 200 | lncRNA | 0.40 | 1 | 11421357 | 11421556 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_11367029_11386064 | NA | coding | downstream | 35293 | 11366815 ~ 11386064 (-) |
| CI01000026_11363296_11365242 | NA | coding | downstream | 56115 | 11362091 ~ 11365242 (-) |
| CI01000026_11353172_11356717 | SLC22A18 | coding | downstream | 64627 | 11352471 ~ 11356730 (-) |
| CI01000026_11308038_11346628 | OTOG | coding | downstream | 74729 | 11307902 ~ 11346628 (-) |
| CI01000026_11280159_11287703 | NA | coding | downstream | 133654 | 11279171 ~ 11287703 (-) |
| CI01000026_11481190_11482991 | NA | coding | upstream | 59525 | 11481081 ~ 11482991 (-) |
| CI01000026_11488673_11493122 | GRPEL1 | coding | upstream | 66395 | 11487951 ~ 11493122 (-) |
| CI01000026_11682328_11694593 | SHRPRBCK1R, SHARPIN | coding | upstream | 260111 | 11681667 ~ 11695000 (-) |
| CI01000026_11745584_11746257 | NA | coding | upstream | 323392 | 11744948 ~ 11746708 (-) |
| CI01000026_11747661_11754397 | NA | coding | upstream | 325244 | 11746800 ~ 11755219 (-) |
| G133999 | NA | non-coding | downstream | 289 | 11420770 ~ 11421068 (-) |
| G133994 | NA | non-coding | downstream | 62629 | 11358436 ~ 11358728 (-) |
| G133828 | NA | non-coding | downstream | 71769 | 11349312 ~ 11349588 (-) |
| G133802 | NA | non-coding | downstream | 114176 | 11301915 ~ 11307181 (-) |
| G133990 | NA | non-coding | downstream | 156045 | 11265084 ~ 11265312 (-) |
| G134001 | NA | non-coding | upstream | 3444 | 11425000 ~ 11425310 (-) |
| G134002 | NA | non-coding | upstream | 4236 | 11425792 ~ 11426017 (-) |
| G134006 | NA | non-coding | upstream | 29570 | 11451126 ~ 11451341 (-) |
| G134031 | NA | non-coding | upstream | 127427 | 11548983 ~ 11652112 (-) |
| G134074 | NA | non-coding | upstream | 282494 | 11704050 ~ 11704490 (-) |
| G133790 | NA | other | downstream | 583752 | 10834015 ~ 10859589 (-) |
| CI01000026_10788054_10788652 | CD59 | other | downstream | 631203 | 10787339 ~ 10789709 (-) |
| CI01000026_10347872_10351783 | CEBPA | other | downstream | 1072400 | 10347746 ~ 10351783 (-) |
| G132721 | NA | other | downstream | 1870713 | 9550030 ~ 9550644 (-) |
| G136110 | NA | other | upstream | 3133361 | 14554917 ~ 14555436 (-) |
| CI01000026_16756776_16760261 | RBPMS2A, RBPMS2B, RBPMS2 | other | upstream | 5335173 | 16756729 ~ 16761341 (-) |
| G137667 | NA | other | upstream | 5384808 | 16806364 ~ 16808372 (-) |
| G137914 | NA | other | upstream | 5561695 | 16983251 ~ 16984352 (-) |
| G137967 | NA | other | upstream | 5646792 | 17068348 ~ 17069433 (-) |
