G134201


Basic Information

Item Value
gene id G134201
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 12150519 ~ 12150775 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU152617
AAACATTAAAGGGTTAGTTCACCCAAAAATGAAAATTTTGTCATTTATTACTCACGCCCATGCCGTTCCAAACCCGTAAGACCTTCGTTAATCTTCGGAACGCAAATTGAGATATTTTTGTTGAAATCCGATGGCTCCGTGAGGCCTACATAGGGAGCAATGACATTTCCTCTCTCAAGATCCATAAAGGTACTATAAACATATTTAAATCAGTTCATGTGAGTACAGTGGTTCAATATTAATATTATAAAGCGACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152617 True 257 lncRNA 0.37 1 12150519 12150775

Neighbor

gene id symbol gene type direction distance location
CI01000026_12094316_12125431 NA coding upstream 24255 12094316 ~ 12126264 (+)
CI01000026_12074163_12076475 MNX1 coding upstream 72979 12073813 ~ 12077540 (+)
CI01000026_11862091_11976290 PTPRN2 coding upstream 174229 11862091 ~ 11976290 (+)
CI01000026_11809092_11810238 NA coding upstream 340108 11808462 ~ 11810411 (+)
CI01000026_11792044_11807684 NCAPG2 coding upstream 342245 11792044 ~ 11808274 (+)
CI01000026_12192269_12200366 NA coding downstream 40877 12191652 ~ 12200734 (+)
CI01000026_12203244_12209526 SHH, SHHA coding downstream 50583 12201358 ~ 12209698 (+)
CI01000026_12425699_12438163 NA coding downstream 273304 12424079 ~ 12438621 (+)
CI01000026_12486292_12534245 SCRIB coding downstream 335111 12485886 ~ 12534327 (+)
CI01000026_12551009_12554565 NA coding downstream 400234 12551009 ~ 12554565 (+)
G134197 NA non-coding upstream 6732 12143509 ~ 12143787 (+)
G134120 NA non-coding upstream 118113 12005870 ~ 12032406 (+)
G134145 NA non-coding upstream 237087 11912221 ~ 11913432 (+)
G134141 NA non-coding upstream 258917 11861568 ~ 11891602 (+)
G133608 NA non-coding upstream 398344 11751165 ~ 11752175 (+)
G134215 NA non-coding downstream 44409 12195184 ~ 12195417 (+)
G134217 NA non-coding downstream 45726 12196501 ~ 12196758 (+)
G134218 NA non-coding downstream 46315 12197090 ~ 12197300 (+)
G134238 NA non-coding downstream 109172 12259947 ~ 12260177 (+)
G134179 NA non-coding downstream 112920 12263695 ~ 12303098 (+)
G133542 NA other upstream 673612 11476117 ~ 11477544 (+)
CI01000026_11241496_11246081 NA other upstream 895446 11241496 ~ 11246204 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 1071439 11075784 ~ 11079080 (+)
G133192 NA other upstream 1988558 10159819 ~ 10161961 (+)
G132667 NA other upstream 2581359 9568739 ~ 9569160 (+)

Expression


Co-expression Network