G134348


Basic Information

Item Value
gene id G134348
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 12604600 ~ 12605365 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU152771
TGTGGCTCATGATCTGTGAGAGGCCTTTGGTCTTCAGGTGCAGGTAGATTTCAGGGATGACATCAGCACGACTCAGCACACATTCAAGGCAGTGTGTCTTCAACATGCCATGCAGCTTTGGCAGCAAATAAAAAACAGGATTTACGAATCGATCCACCAAAGGTGGGAAGTGTTTGGACACTTTGCTTAGGCAAACAATAAATTTGTCATCCACCTCCTTCTTTCTCAAATCCATGAGCTTTGTAACAGTGATATTCAATAAGGGCCCTTCATTTTGATTTTCTCGCTCAGTCATGTAGTTTAGGATTAACCCAATGATCTCAGCAGCTGCTGAGTACACCTCCTTATATCTGATGAATGACAAGTTGTTGGCCAGTGACTGAAAGTATCTGTCATGCTCAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152771 True 404 lncRNA 0.43 4 12604600 12605365

Neighbor

gene id symbol gene type direction distance location
CI01000026_12582462_12589223 GAREM, GAREM1 coding upstream 15043 12582304 ~ 12589557 (+)
CI01000026_12562467_12570436 DPH2 coding upstream 33826 12562467 ~ 12570774 (+)
CI01000026_12558237_12560933 RGS9BP coding upstream 42982 12558237 ~ 12561618 (+)
CI01000026_12551009_12554565 NA coding upstream 50035 12551009 ~ 12554565 (+)
CI01000026_12486292_12534245 SCRIB coding upstream 70273 12485886 ~ 12534327 (+)
CI01000026_12653232_12657339 CHPF2 coding downstream 47707 12653072 ~ 12657836 (+)
CI01000026_12706512_12707086 NA coding downstream 99928 12705293 ~ 12707152 (+)
CI01000026_12867260_12871481 NA coding downstream 261846 12867211 ~ 12871720 (+)
CI01000026_12929788_12932668 HRH3 coding downstream 324274 12929639 ~ 12933391 (+)
CI01000026_12966022_12977066 ORC6 coding downstream 360231 12965596 ~ 12977588 (+)
G134345 NA non-coding upstream 419 12503262 ~ 12604181 (+)
G134306 NA non-coding upstream 6901 12595796 ~ 12597699 (+)
G134314 NA non-coding upstream 123130 12456629 ~ 12481470 (+)
G134329 NA non-coding upstream 148138 12451916 ~ 12456462 (+)
G134350 NA non-coding downstream 3901 12609266 ~ 12609676 (+)
G134356 NA non-coding downstream 11590 12616955 ~ 12617540 (+)
G134357 NA non-coding downstream 14076 12619441 ~ 12621548 (+)
G134359 NA non-coding downstream 16554 12621919 ~ 12622715 (+)
G134319 NA non-coding downstream 20464 12625829 ~ 12627728 (+)
G133542 NA other upstream 1127693 11476117 ~ 11477544 (+)
CI01000026_11241496_11246081 NA other upstream 1349527 11241496 ~ 11246204 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 1525520 11075784 ~ 11079080 (+)
G133192 NA other upstream 2442639 10159819 ~ 10161961 (+)
G132667 NA other upstream 3035440 9568739 ~ 9569160 (+)

Expression


Co-expression Network