Gene
RNA
| Item | Value |
|---|---|
| gene id | G135623 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 14148899 ~ 14149114 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU154191 | True | 216 | lncRNA | 0.42 | 1 | 14148899 | 14149114 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_13744060_13791879 | CDH8 | coding | downstream | 357020 | 13744060 ~ 13791879 (-) |
| CI01000026_13299234_13300178 | NA | coding | downstream | 847959 | 13298482 ~ 13300940 (-) |
| CI01000026_13082079_13210565 | ITFG1 | coding | downstream | 938334 | 13082079 ~ 13210565 (-) |
| CI01000026_13053390_13065531 | NETO2 | coding | downstream | 1083368 | 13051213 ~ 13065531 (-) |
| CI01000026_13039331_13039570 | NA | coding | downstream | 1109329 | 13039271 ~ 13039570 (-) |
| CI01000026_14156809_14170720 | CDH11 | coding | upstream | 7235 | 14156349 ~ 14170720 (-) |
| CI01000026_14376741_14381102 | NA | coding | upstream | 227456 | 14376570 ~ 14382093 (-) |
| CI01000026_14680424_14682203 | TK2 | coding | upstream | 531245 | 14680359 ~ 14682203 (-) |
| CI01000026_14684215_14684738 | NA | coding | upstream | 535089 | 14684203 ~ 14685091 (-) |
| CI01000026_14697383_14715245 | CMTM4 | coding | upstream | 547929 | 14697043 ~ 14715245 (-) |
| G135621 | NA | non-coding | downstream | 1022 | 14147638 ~ 14147877 (-) |
| G135456 | NA | non-coding | downstream | 168608 | 13980044 ~ 13980291 (-) |
| G135448 | NA | non-coding | downstream | 182674 | 13965957 ~ 13966225 (-) |
| G135431 | NA | non-coding | downstream | 231517 | 13917116 ~ 13917382 (-) |
| G135430 | NA | non-coding | downstream | 232026 | 13916457 ~ 13916873 (-) |
| G135631 | NA | non-coding | upstream | 73982 | 14223096 ~ 14223391 (-) |
| G135632 | NA | non-coding | upstream | 75045 | 14224159 ~ 14224452 (-) |
| G135633 | NA | non-coding | upstream | 76230 | 14225344 ~ 14225561 (-) |
| G135725 | NA | non-coding | upstream | 151661 | 14300775 ~ 14301243 (-) |
| G135771 | NA | non-coding | upstream | 185457 | 14334571 ~ 14334908 (-) |
| G133802 | NA | other | downstream | 2841718 | 11301915 ~ 11307181 (-) |
| G133790 | NA | other | downstream | 3311294 | 10834015 ~ 10859589 (-) |
| CI01000026_10788054_10788652 | CD59 | other | downstream | 3358745 | 10787339 ~ 10789709 (-) |
| CI01000026_10347872_10351783 | CEBPA | other | downstream | 3799942 | 10347746 ~ 10351783 (-) |
| G132721 | NA | other | downstream | 4598255 | 9550030 ~ 9550644 (-) |
| G136110 | NA | other | upstream | 405803 | 14554917 ~ 14555436 (-) |
| CI01000026_16756776_16760261 | RBPMS2A, RBPMS2B, RBPMS2 | other | upstream | 2607615 | 16756729 ~ 16761341 (-) |
| G137667 | NA | other | upstream | 2657250 | 16806364 ~ 16808372 (-) |
| G137914 | NA | other | upstream | 2834137 | 16983251 ~ 16984352 (-) |
| G137967 | NA | other | upstream | 2919234 | 17068348 ~ 17069433 (-) |
