Gene
RNA
| Item | Value |
|---|---|
| gene id | G136129 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 14606651 ~ 14607579 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: MAP7 domain-containing protein 1-like isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU154720 | True | 406 | lncRNA | 0.48 | 2 | 14606651 | 14607579 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_14376741_14381102 | NA | coding | downstream | 224558 | 14376570 ~ 14382093 (-) |
| CI01000026_14156809_14170720 | CDH11 | coding | downstream | 435931 | 14156349 ~ 14170720 (-) |
| CI01000026_13744060_13791879 | CDH8 | coding | downstream | 814772 | 13744060 ~ 13791879 (-) |
| CI01000026_13299234_13300178 | NA | coding | downstream | 1305711 | 13298482 ~ 13300940 (-) |
| CI01000026_13082079_13210565 | ITFG1 | coding | downstream | 1396086 | 13082079 ~ 13210565 (-) |
| CI01000026_14680424_14682203 | TK2 | coding | upstream | 72780 | 14680359 ~ 14682203 (-) |
| CI01000026_14684215_14684738 | NA | coding | upstream | 76624 | 14684203 ~ 14685091 (-) |
| CI01000026_14697383_14715245 | CMTM4 | coding | upstream | 89464 | 14697043 ~ 14715245 (-) |
| CI01000026_14720591_14737569 | DYNC1LI2 | coding | upstream | 112237 | 14719816 ~ 14737569 (-) |
| CI01000026_14780225_14789500 | NAE1 | coding | upstream | 172509 | 14780088 ~ 14790709 (-) |
| G136107 | NA | non-coding | downstream | 27333 | 14576171 ~ 14579318 (-) |
| G136118 | NA | non-coding | downstream | 31928 | 14574466 ~ 14574723 (-) |
| G135927 | NA | non-coding | downstream | 144074 | 14462277 ~ 14462577 (-) |
| G135917 | NA | non-coding | downstream | 157812 | 14448606 ~ 14448839 (-) |
| G135886 | NA | non-coding | downstream | 202537 | 14403897 ~ 14404114 (-) |
| G136156 | NA | non-coding | upstream | 29941 | 14637520 ~ 14637980 (-) |
| G136170 | NA | non-coding | upstream | 58766 | 14666345 ~ 14666577 (-) |
| G136214 | NA | non-coding | upstream | 244188 | 14851767 ~ 14852100 (-) |
| G136344 | NA | non-coding | upstream | 452371 | 15059950 ~ 15060174 (-) |
| G136377 | NA | non-coding | upstream | 469232 | 15076811 ~ 15077839 (-) |
| G136110 | NA | other | downstream | 51215 | 14554917 ~ 14555436 (-) |
| G133802 | NA | other | downstream | 3299470 | 11301915 ~ 11307181 (-) |
| G133790 | NA | other | downstream | 3769046 | 10834015 ~ 10859589 (-) |
| CI01000026_10788054_10788652 | CD59 | other | downstream | 3816497 | 10787339 ~ 10789709 (-) |
| CI01000026_10347872_10351783 | CEBPA | other | downstream | 4257694 | 10347746 ~ 10351783 (-) |
| CI01000026_16756776_16760261 | RBPMS2A, RBPMS2B, RBPMS2 | other | upstream | 2149150 | 16756729 ~ 16761341 (-) |
| G137667 | NA | other | upstream | 2198785 | 16806364 ~ 16808372 (-) |
| G137914 | NA | other | upstream | 2375672 | 16983251 ~ 16984352 (-) |
| G137967 | NA | other | upstream | 2460769 | 17068348 ~ 17069433 (-) |
