Gene
RNA
| Item | Value |
|---|---|
| gene id | G137126 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 15886242 ~ 15886907 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: zinc transporter Slc39a7-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU155778 | True | 666 | lncRNA | 0.33 | 1 | 15886242 | 15886907 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_15780006_15782114 | NA | coding | downstream | 103967 | 15779650 ~ 15782275 (-) |
| CI01000026_15617263_15620665 | NA | coding | downstream | 265295 | 15616920 ~ 15620947 (-) |
| CI01000026_15604078_15614242 | NA | coding | downstream | 271587 | 15603964 ~ 15614655 (-) |
| CI01000026_15457228_15461956 | NA | coding | downstream | 424286 | 15457198 ~ 15461956 (-) |
| CI01000026_15444272_15445552 | NA | coding | downstream | 440690 | 15444052 ~ 15445552 (-) |
| CI01000026_15930136_15933539 | TSHZ3B, TSHZ3 | coding | upstream | 42896 | 15929803 ~ 15933539 (-) |
| CI01000026_16297047_16419596 | NA | coding | upstream | 409735 | 16296642 ~ 16419739 (-) |
| CI01000026_16432592_16456842 | NA | coding | upstream | 545620 | 16432527 ~ 16456842 (-) |
| CI01000026_16553812_16554906 | NA | coding | upstream | 666475 | 16553382 ~ 16555883 (-) |
| CI01000026_16645459_16698069 | MTSS1L | coding | upstream | 758357 | 16645264 ~ 16698069 (-) |
| G137109 | NA | non-coding | downstream | 12575 | 15873460 ~ 15873667 (-) |
| G137094 | NA | non-coding | downstream | 30964 | 15855001 ~ 15855278 (-) |
| G137092 | NA | non-coding | downstream | 34596 | 15851365 ~ 15851646 (-) |
| G137042 | NA | non-coding | downstream | 108954 | 15770648 ~ 15777288 (-) |
| G136993 | NA | non-coding | downstream | 169617 | 15715533 ~ 15716625 (-) |
| G137128 | NA | non-coding | upstream | 3371 | 15890278 ~ 15890502 (-) |
| G137130 | NA | non-coding | upstream | 4385 | 15891292 ~ 15891546 (-) |
| G137246 | NA | non-coding | upstream | 178413 | 16065320 ~ 16065547 (-) |
| G137596 | NA | non-coding | upstream | 208108 | 16095015 ~ 16095270 (-) |
| G137625 | NA | non-coding | upstream | 283992 | 16170899 ~ 16171293 (-) |
| G136110 | NA | other | downstream | 1330806 | 14554917 ~ 14555436 (-) |
| G133802 | NA | other | downstream | 4579061 | 11301915 ~ 11307181 (-) |
| G133790 | NA | other | downstream | 5048637 | 10834015 ~ 10859589 (-) |
| CI01000026_10788054_10788652 | CD59 | other | downstream | 5096088 | 10787339 ~ 10789709 (-) |
| CI01000026_10347872_10351783 | CEBPA | other | downstream | 5537285 | 10347746 ~ 10351783 (-) |
| CI01000026_16756776_16760261 | RBPMS2A, RBPMS2B, RBPMS2 | other | upstream | 869822 | 16756729 ~ 16761341 (-) |
| G137667 | NA | other | upstream | 919457 | 16806364 ~ 16808372 (-) |
| G137914 | NA | other | upstream | 1096344 | 16983251 ~ 16984352 (-) |
| G137967 | NA | other | upstream | 1181441 | 17068348 ~ 17069433 (-) |
