XLOC_008502 (si:ch211-167j9.4)


Basic Information

Item Value
gene id XLOC_008502
gene name si:ch211-167j9.4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 23799461 ~ 23801499 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017011
GATTGGCCGCGGAATAAGGCAGGGGTGCCCTTTGTCaccgtttttatttattttagcggTAGACATGTTAGctacaaaaattaaatatgataattcagtggagaaattaaatattttcGGAAAAACAATAGGAATTAGTCAGCTAGCGGACGACaccacattatttttaaaaaataaagaccaAATTTCTCCAGCTATCTCTTTAATTAGTtctttttgtaaagcatctggcctccaattaaatttaaacaaatgtgaACTTTTAGCTCTTCACCCTAGTCCAGATCTATCCCTGTTTAACATCCCAGTAAAAGAAACTGTGAAATATTTAGGCATTTTGATCTCAAAAGATTCAAACATTAACATCAAAGAAAACTTTGAAAATAAAGTACATAAAGCTAATGGTATCCTGAATTGCTGGCTGCAGAGAGATATTTCCATTTTTGGACGAATTCTTCTATCCAAGGTTGAATATCTATCAAAACTAATTTATCCTGCTCAAGCTTTAGCTCCCTCTTCAGCAATCATAAAAACAAGTAACCAAAAAATGTATGACTTTATTTGGAGACACAAAAcccattatattaaaaaatctgatattaTCAAATCGTATGAAGAAGGTGGTCTTAATATTATTGAGTTCGAAAGTATGAATAGTATGTTAAAACTGAAATGGCTTCAAAGGTTTTTGAGTAATACTGAGAGTTTCTGGTACACTGTTCCTTGTGCCTTGTTTAACAAACTAGGTGGCATCCGATTTCTTCTCAGATGTGATTTTGACTTGCCTAAACTCCCAGTGAAGCTTTCAGCATTCCACCAACAAGTCTTGCTGTCTTGGAAACTagcgcacacacacaattttacaCCTCACAATACCCCTATTTGGAATAACAAGTATATTCTACACAGGAACAAATCCATTTTTTATGAAGaatggttaaataaaaatatttggtcAGTAACAGACTTAATGGATGGAAGGGGCAATATTCTAGATTACAATACTTTCACTCTAAGACACGGATTTGCTTGTCATCCAAAGCAATTTTTCACTGTTATTAATGCTATACCCTCAGgtataaaaatgttaatgaaaagTTACCTATCCTATTCGAAAATTACTCCAGTCCTTCCCTTATTATATACTGGTGAGATTGAATTTGATAATAAACTTTGCACTAATAAACATTTAAGACAAATTATTATCCAATCTTGTTTCCCTTATCAAGTATTAAGAAATAGGTTATTTCATTCAGTGgataaaaatactgttaaatattttagaacaacTTATCTTAAATTTCCAATTCTCCCCAAGGCAAAAgaagtacaatttaaaatattaaatgatatataCCCTTCTAATAGATTCTTACACCTAAAATTTAACTTAGAAAACTCACCATGCCATTTATGTAAACACTTTAGTGAAGACACAGAACACATATTTTTCTCTTGCAACGCCGTTCAATCATTGTGGAAAAAAGTACAAGACTGGTTGATAATAAAAAACGTGGTTGCTGAAGGTTCGACTTTTACATTACAAAATGTACTATATGGAATTACTAAAGATGGTTCTACTTTGCACGATTTGATAAATATGATAATTGTGTTagccaaatattttattcataaatgtagatATTTCAAAACTCCTCCATtacttattgtatttaaaaaagaacttaaaatattttcagatgccctggttaaaatgaaaacaaaaaatgccttaaaaatgttcaatttatttgttatatataactTGCCATAGATGATATATGTtgtacttaatttttatttatttactcatttaatttTTGCTTTTTCCTTTCACTATTGGATTTATTTAACTtgaatgttttttgtatattacatttgtatctttgtatattattttgtgttgagcCTTCCATATATAACACACAAGTTGTAAAGTTGAATCCCATTTTGTTGTATTtggattttgtattttcaataaaaaaaataaataaataaataaataaaaaaaaaaaataaataaaaaaacaagggcaaag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097770

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017011 True 2039 mRNA 0.30 1 23799461 23801499

Neighbor

gene id symbol gene type direction distance location
XLOC_008501 ift20 coding upstream 9289 23784842 ~ 23790172 (+)
XLOC_008500 sae1 coding upstream 60357 23722620 ~ 23739104 (+)
XLOC_008499 klc3 coding upstream 122015 23657051 ~ 23677446 (+)
XLOC_008498 MARK4 coding upstream 157945 23550890 ~ 23641516 (+)
XLOC_008497 si:dkey-182i3.9 coding upstream 257317 23523337 ~ 23542144 (+)
XLOC_008503 si:ch1073-145m9.1 coding downstream 110156 23911655 ~ 23918483 (+)
XLOC_008504 myo18ab coding downstream 146433 23947932 ~ 24120921 (+)
XLOC_008505 NA coding downstream 198070 23999569 ~ 24005283 (+)
XLOC_008506 NA coding downstream 331055 24132554 ~ 24132837 (+)
XLOC_008507 NA coding downstream 348469 24149968 ~ 24162100 (+)
XLOC_008463 BX663520.1 misc upstream 2547179 21252191 ~ 21252282 (+)
XLOC_008496 NA non-coding upstream 293804 23467984 ~ 23505657 (+)
XLOC_008494 CR847979.1 non-coding upstream 421273 23378071 ~ 23378188 (+)
XLOC_008492 NA non-coding upstream 531084 23266658 ~ 23268377 (+)
XLOC_008490 NA non-coding upstream 591997 23207159 ~ 23207464 (+)
XLOC_008488 NA non-coding upstream 1238324 22541344 ~ 22561137 (+)
XLOC_008508 NA non-coding downstream 378433 24179932 ~ 24205981 (+)
XLOC_008509 NA non-coding downstream 390211 24191710 ~ 24198497 (+)

Expression


Co-expression Network