G137674


Basic Information

Item Value
gene id G137674
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 16784325 ~ 16787020 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU156398
CGTTGCACAGTGCTCTCTTTCTCCCATGCGTGAAAATTTCGGTTAGTTGCCCATCTTTGTCGAGTTTTTCCACGGATGAACCAATTCAGAAAATAATTGAAGCTGGAATACAGATTAACGAAGAAGAGGCAAGGAAATTCAGGGGAAACTTGTGTTGGGGAGGATTCATGATCTGTTGAGGCCCATGTGAACGTTCTACAAAGTGAGTATCGGAAGACACATCCAGAAATCTCGACTGTCAAAGACTGCATGGCACAAACATTCTCCTGGAGACGTCAAGAAATCATGGAAGGAATGTCTGTGGAGGATGTAGTCAAATAGTACCCATACTTAAGAACGCCTGCTGGAGTTGTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATGATGAGATTGACTGAATCGTTTCAGAGAGGGCTTCACTAGAGTTCTGCCAAATGTGCTGAAACTTGCCAAGGCAAAATCCCCCCCCTAGCAAAACAGTACACTGAAACAAGACAGGATGCCCTGGCTGAAGATCTACCAGGGGGACCCTGCTACACCCTTTCCAACCATTCAACTGATGGAGAATGCCCTCTTCCAATGATTGCCATTTTCCAATCGCAGTGTGGTGACGGTAGATGAAATGGTCATGTGCCAGTGCACCAGCCTTGACGAAGCCTTCATGACAGCCGTCTGTATTTGTTTCAACACTGCATATCCACCACACCTGAAGATAATTCTGAAGCCTACCTCTCTCATAGTAATGTAGTGTTCAAACTTTTCTCTAAAGATGGATGGCAAGAGGATAAGCCCAGCCCTTAAGTCAATTCCTGAATGTAGAAAAATATTCTAGTTTCACAATCACATATTTTGCAATGTTGTAAAGCAAATTACATATATTGTGAGTTTCACTAGCAAAGTGACTGTTTGGACAGATCAAGTACATACTTAACTTTGATACCACATGGATGCTTTGCAGTAAGATCTTGCTTCCATCGTCCTTTGATTCACATTTTCATGCATATCCTGTAAGAGTAGACAGTGACTGGATTTTGCTTAAACCTGGAGATGAGTTGGACCACACATCGCTTGACACATACAGTTGATAATCTGTATGTTGGATTGAGACATTTTGTGTAAATGCTTGCTGGTCTTTGGCAAGGTCATATGAATAGGATGCTTAGTGTACAGGTATGCCAAAAATGAAACTTGTCATTTACTCCCCCTCATGTTGTTCCAAACCTACATGAATTCTTTCTTCAGTTGAACACAGAAGATACTTTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156398 True 1294 lncRNA 0.40 4 16784325 16787020

Neighbor

gene id symbol gene type direction distance location
CI01000026_16756776_16760261 RBPMS2A, RBPMS2B, RBPMS2 coding downstream 24064 16756729 ~ 16761341 (-)
CI01000026_16739750_16751270 CPEB1B coding downstream 33055 16739248 ~ 16751465 (-)
CI01000026_16645459_16698069 MTSS1L coding downstream 86256 16645264 ~ 16698069 (-)
CI01000026_16553812_16554906 NA coding downstream 228442 16553382 ~ 16555883 (-)
CI01000026_16432592_16456842 NA coding downstream 327483 16432527 ~ 16456842 (-)
CI01000026_16817010_16832208 SIN3AB coding upstream 29275 16816295 ~ 16832208 (-)
CI01000026_16959659_16962519 CDKN1CA coding upstream 172253 16959273 ~ 16963221 (-)
CI01000026_16988458_16994714 TRAF6 coding upstream 200796 16987816 ~ 16995104 (-)
CI01000026_17021405_17034147 MFGE8A coding upstream 233497 17020517 ~ 17034147 (-)
G137678 NA non-coding downstream 78 16783404 ~ 16784247 (-)
G137751 NA non-coding downstream 149917 16634181 ~ 16634408 (-)
G137771 NA non-coding upstream 5399 16792419 ~ 16792637 (-)
G137669 NA non-coding upstream 24491 16811511 ~ 16813504 (-)
G137776 NA non-coding upstream 58027 16845047 ~ 16845250 (-)
G137781 NA non-coding upstream 65305 16852325 ~ 16852683 (-)
G137782 NA non-coding upstream 67355 16854375 ~ 16854623 (-)
G136110 NA other downstream 2228889 14554917 ~ 14555436 (-)
G133802 NA other downstream 5477144 11301915 ~ 11307181 (-)
G133790 NA other downstream 5946720 10834015 ~ 10859589 (-)
CI01000026_10788054_10788652 CD59 other downstream 5994171 10787339 ~ 10789709 (-)
G137667 NA other upstream 19344 16806364 ~ 16808372 (-)
G137914 NA other upstream 196231 16983251 ~ 16984352 (-)
G137967 NA other upstream 281328 17068348 ~ 17069433 (-)

Expression


Co-expression Network