CI01000027_00089337_00092919


Basic Information

Item Value
gene id CI01000027_00089337_00092919
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 88779 ~ 93085 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_00089337_00092919.mRNA
GAATAAAAACGTCTAAACAAACTCATCAAATCAGATCATACTTGGTCAAAGACTTTTTATATATCTTAAAGGGACTTTGACTGGGTCTGACCTAACCAAAACACTTGAGAACGAATAATTATAATTTAAATTTCAACTTCATTATATGATCTAAACGTCTTGTGGGGATCAAAACTTTGTTTCTATGCAAATATGAACTGTTTTCAACATCAGAAATGTTTCTTGAGCAGCAAATCATCAAATTAGAATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGATCACAGGAATAAATTACAGTTTACTTTATATTCACATAGAAAACAGATATTTTAAATTGTAAAAATATTTCACATTTTTTACTGTATTTTTGATCAAATAAATGCAGTCTTGGTGAGTAGAAGAGACTTATTTCAAAAACATTATACGCCAAGCTTGCAAACAGTATAGTGTTCTACTACATAATAATCATTCTATTTCTAAAAAGCCTCTCCTAGTGATCCATACAGCAGCTGTACGGGAGGAAAAATGTGCCAGGCCAAGTTTGGGAATGGAGAATGTGATGAGGAGTGCTTGAGTTCTGCCTGTCTGCATGATGGATTTGACTGCCTCAAAGAAAAAGGCTCCTGCATTTCAGGGCATATTCAATACTGTCGAAATCATTATGACAACGGTTACTGCGACCAGGGCTGCAACACCGCCCCCTGTGGGTGGGACGGCTCGGACTGCCACAAAAAGCAGTATCCCGCCTGGGCCAAAGGAAGCCTCATACTGCACACTAGAATCCCATTCCAGAGGGATGAAGCTAACTGTAACCCACATACAATTCAGCCTGTTCATCCTTCATACCAGCCTGCTGCTCCCTCATCCCAGTCTGTTGGTCCCTCTTCACAGTCTGCCTTCTCCCAGGTTGCTACTACTGCCTTTTCCCAGTCTGCTGCTCCCTCATCCCAGTCTGCCTTTTCCCAGTCTGTTGCTCCCTCATCCCAGTCTGCTGCTCTCTCTTCACAATCTGCCTTCTCCCAAGTCGCTACTACTGCCTCATCCCAGTTTACTGCTCCCTCATACCAGTCTGCCTTCTCCCAGTCTGCTGCTCCCTCATCCCAGTCTGTTGCTCCCTCTTCCGAGTCTGTTGCTCCCTCTTCACAGTCTGCCTTCTCCCAGGTTGCTACTACTGCATCATCCCAGACTGCCGCTCCCTCATACCAGTCTGCCTTCTCGCTCCCTCTTCCCAGTCTTTTGCTCCCTCTTCACACTCTGCCTTCTCCCAGGTTGCTACTACTCCCTCATCCCAGTCTGCCACTCCCTCATCCCAGTCTGTTGCTTCCTCTTCACAGTCTGCCTTCTCCCAGGTTGCTATTACTCCCTCATCCCAGTCTGCCACTCCCTCATACCAGTCTGTTGCTCCCTCTTCCCAGTCTGTTGCTCCCTCTTCACAGTTTGCCTTCTCCCAGCCTTCTGCTCCCTAATCTCAGTCTGTTGCTCCCTCTTCCCAGTCTGTTGCTCCCTCTTCACAGTCTGCCTTTTCCCAGGTTGCTACTACTCCCTCATCCCAGTCTGTTGCTCCCTCTTTCCAGCCTGCCTTCTCCCAGCCTGCTACTGCTTGATCTGCCTGACCCTCTTGGTGTTGCTGCTGAGGCTCTCCCACCTGCCAGTGTCCATGCTGTTGCTCCACCACAGGTCCAGGGAGATCAACATATCTACAACCTGCCACAAAGCACAGCTGGGCAAGCTAGACTAAAAAGGCGCATCTCTAGCAAAACAACTGAGGCGGTCATACCTAAGCTACCAACCCCGAGGCCAATAATTCCTCAGCCTGTTGGCAACCTGCAACAAGTTCCTGTCCTTCCCAGGCTCAGCCCGAGTGTCCCCCTTGACTCCCACATTACCACTACCTTCACACTGTTTGTTGTCCCTCAAAATCCTCTTCCTATAGCCCCAACCACTCCTAGTTTAGACCTCCCACCTCCTGCCACGGTGTATTTGATGTTTCATCTCGATGATTTGAGTGTCGAGCGCTCTCGCGTCACGAGTGTCGCGCACATCACGTCGAAACTCCTGCATTCTCTTCTTCAGTTCCTTTGCGCAGCGCTGAACGTGAACACATCTAATGTTACGTCAAGCGTACCCTAATTAATATTCATTAGTGCTATCCGCAAATACTTTATATATATGTTAAAGGGGCTTTGGGTCTGACCAGTTACCTAAACTACTTTACAGTTTACTTGGCTGCTGTTTTCTTAACATAACTACAGATGATCACTGTTTTGGGGATTTTGGTTTAATAATGTGTTTTTTA
>TU156838
ACAGCAGCTGTACGGGAGGAAAAATGTGCCAGGCCAAGTTTGGGAATGGAGAATGTGATGAGGAGTGCTTGAGTTCTGCCTGTCTGCATGATGGATTTGACTGCCTCAAAGAAAAAGGCTCCTGCATTTCAGGGCATATTCAATACTGTCGAAATCATTATGACAACGGTTACTGCGACCAGGGCTGCAACACCGCCCCCTGTGGGTGGGACGGCTCGGACTGCCACAAAAAGCAGTATCCCGCCTGGGCCAAAGGAAGCCTCATACTGCACACTAGAATCCCATTCCAGAGGGGTCAGTTCCAGAACGGCTCTCTGTTATGGGCCTTAAGCACTGTCCTCCAGACCAGCGTCAAACTCAGAGGAATGGCACCTCTCCAGCCCACCTCTGACCTTCTGACAATGGACACTCGACAGCTGGCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_00089337_00092919.mRNA False 2329 mRNA 0.46 4 88779 93085
TU156838 True 423 TUCP 0.53 2 89314 89877

Neighbor

gene id symbol gene type direction distance location
CI01000027_00000579_00037786 NA coding upstream 50927 579 ~ 37852 (+)
CI01000027_00122108_00124986 NA coding downstream 28939 122024 ~ 124986 (+)
CI01000027_00229612_00237058 RAD21A, RAD21B, RAD21 coding downstream 135920 229005 ~ 237759 (+)
CI01000027_00238851_00240657 NA coding downstream 145766 238851 ~ 240991 (+)
CI01000027_00250077_00273130 EIF3H coding downstream 156671 249756 ~ 273130 (+)
CI01000027_00365674_00371897 CSMD3 coding downstream 271905 364990 ~ 371996 (+)
G138062 NA non-coding upstream 167 87492 ~ 88612 (+)
G138029 NA non-coding upstream 9914 77537 ~ 78865 (+)
G138060 NA non-coding downstream 15039 108124 ~ 109084 (+)
G138068 NA non-coding downstream 18259 111344 ~ 113090 (+)
G138077 NA non-coding downstream 59203 152288 ~ 152795 (+)
G138090 NA non-coding downstream 92965 186050 ~ 186273 (+)
G138093 NA non-coding downstream 98095 191180 ~ 191429 (+)
G138057 NA other downstream 474 93559 ~ 96727 (+)
CI01000027_00391159_00499309 CSMD3 other downstream 325209 390683 ~ 499760 (+)
G138238 NA other downstream 736689 829774 ~ 831683 (+)
G138247 NA other downstream 762303 855388 ~ 893121 (+)
G138290 NA other downstream 902885 995970 ~ 999181 (+)

Expression


Co-expression Network