CI01000027_00122108_00124986


Basic Information

Item Value
gene id CI01000027_00122108_00124986
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 122024 ~ 124986 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_00122108_00124986.mRNA
GTATTTAAATGCTTTAATGTCAAGATGAACAAAGTCTCTGCATTTTTATAGGCTTCTTCAATGGAGAGCTGTGTAGAAGTTATGATGGACTGCCCCGAGGTCAAAGCTGAAACCTCAGCGGACGACAAGCATTTGGAGCCCCTTCTCATTCTCGAGGAGGGGGACGAACCTTCGGATGTGATAAACAGCGGAGAGAGAGGAAGGGCCGTACTGAGAGTTTGGGCGGCTGATGAAAACACAGAAGATGAAGCCGCAGAGGGAAGCTCACATGATCACAACAATGTCCGAGTAGATGAAAGCAAGAGTGAAGCGATGGAAATGAACGAGGAGAGGAACGCAACTCTAGAACGGCAGGTGGACGATACAAAAACCCATGAGGGACTGTCAGACGGGACAGCTGAGGTGTCAGAGGAAAAACCGACGGCTCAAGCAGAAGTGAAGCTGCGGCCCAAAGACACACTGAGCCCTCATGATGCAAAGCCTACGGCTCACAGGTTATCTCCAGATTTCCCTGACGCTCTGTGTGAGCTGCTGTTCGCGTTACAGGAGGGCCGGCGGCTCAACGACCAGCGCTGCTCGTTCCGTCTGGAGCACCGCAGGAGGTGCTACTCTGAGCCCAGCACGCCTCGCCACAGTCAGAGAGTGGTGTTCTCCTCCATGACGTCCCTGCAGAAGGAGGAGTTCTTCGACTTGTTGGCGACCTCACAGGCTCGTCGACTGGATGACCAGCGCGCAGAACTCCAGAACGCTCCCCCCGCCCCCCCTCCGCCCCTGACCAAAGCCAAACAGAGGAAGAGCAGCTGTAAGGTCACAGAGGTCACCCGAGCGGTTCCCACACAAACACCCAAAGAGGACTTATACAACATGATCGTCAACTCACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_00122108_00124986.mRNA True 882 mRNA 0.54 3 122024 124986

Neighbor

gene id symbol gene type direction distance location
CI01000027_00089337_00092919 NA coding upstream 28939 88779 ~ 93085 (+)
CI01000027_00000579_00037786 NA coding upstream 84172 579 ~ 37852 (+)
CI01000027_00229612_00237058 RAD21A, RAD21B, RAD21 coding downstream 104019 229005 ~ 237759 (+)
CI01000027_00238851_00240657 NA coding downstream 113865 238851 ~ 240991 (+)
CI01000027_00250077_00273130 EIF3H coding downstream 124770 249756 ~ 273130 (+)
CI01000027_00365674_00371897 CSMD3 coding downstream 240004 364990 ~ 371996 (+)
CI01000027_00391159_00499309 CSMD3 coding downstream 265697 390683 ~ 499760 (+)
G138068 NA non-coding upstream 8934 111344 ~ 113090 (+)
G138060 NA non-coding upstream 12940 108124 ~ 109084 (+)
G138062 NA non-coding upstream 33412 87492 ~ 88612 (+)
G138029 NA non-coding upstream 43159 77537 ~ 78865 (+)
G138077 NA non-coding downstream 27302 152288 ~ 152795 (+)
G138090 NA non-coding downstream 61064 186050 ~ 186273 (+)
G138093 NA non-coding downstream 66194 191180 ~ 191429 (+)
G138094 NA non-coding downstream 71791 196777 ~ 197714 (+)
G138104 NA non-coding downstream 91302 216288 ~ 217000 (+)
G138030 NA other upstream 21767 39146 ~ 100257 (+)
G138238 NA other downstream 704788 829774 ~ 831683 (+)
G138247 NA other downstream 730402 855388 ~ 893121 (+)
G138290 NA other downstream 870984 995970 ~ 999181 (+)
G138436 NA other downstream 1381975 1506961 ~ 1507816 (+)

Expression


Co-expression Network