CI01000027_00250077_00273130 (EIF3H)


Basic Information

Item Value
gene id CI01000027_00250077_00273130
gene name EIF3H
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 249756 ~ 273130 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_00250077_00273130.mRNA
ACATAAAAATAATAACATTAGCATGTAAAACAATGACAGTAGCTCTTGTGTTTGGCTGTTGGGTAATGCTTGTTATGATCTGCTTCTCCGGAGGGCCATATTTCATCCAGCGGGCTGCCATAAGGCACTACTGCGTAAAATAGTTATTGTGTTTTGCCTCTCTAGAGGGTTCCCCCCTAATTGACTGCTTGAAATATGAAGTTCATGGAGAACCATGTGGTTCATTGTTGCGTTTGTCCTCTTCTAGAGATGAGATATAGTCCTGATGCAGATGTGAGAAGAGGACCTTGTTGTGCCTGTTGGTGCATCATATAATGAAGGATGAGCGAATCCCTTTCCATTTTGGCGAGCCATCCCGGCTCCGAGCGCTCGCGCCGCTTACGTCCTTCTTATTCTGATGTTGTTTCAGTGCAAGTCATATTGAAAGTTCCTACAGCGCGCACCTCGTCAGTCCCATGGGATTCTCCTCACGGACTGTCTTCATGCTCAGGCTCCGGCCCGTTCTCTTTCAGAGATAGCCCATGCCTTCTTGCTGGCGTCTCATTGAAGAATGTGCTTTTACAACCACCGACTGTTAAATCCATGCTAGATCTATTGGGGTCTATTATTGCTGTGGACACCAGATTTCTCAGCTTCATCCGGTATTGGCAGACCTTGCCGGGTGGAGGCAGTGGCGCAGTAGATTGCCACGACGGGAGGCATCTTGTTATTCCAAATGGAAGACTGGTGGGTGTCAGAGGGCCCAGTGTTGACCTTTGTTGGTTGAACGTGCACAGTGGTGGTTTTAAATCATCTGGTTTAATCTTTTTTGGGTTAAAGCTGGCGTTTCGGATTGGCCATTTTGCAGTACCATCACGCAGGCTGCACAGCCGTATCAAATTAGAGAATTGCAGCTTTGGAAGGCTGAGACGCATGCATAATGCAGATCTCTATCCGTTTGATTGTCACTGCTGCGGCCTGAAGGAGCCGTGGCATTGTCTTTCGGTTATTGCTATTGGAGTGCCTGCAATCGACCATCTATGCAAATTCTCCAAGGATTCGAATGTTCTCCTATCTGACATGATCAGGAACATCTTTCCTCGCTGTGGCTCCTCGGCTGGTTCTTGCACTACGTTCTTTAAAACGTCGCCCCCCTCGTGCATTCGCTTGGAGGAAGCCAACCAAGAGTTTCGGAACAAATTACATCTCGCTGTCTCATTCATATTCACCGTCGCCTGTCAGGACCTAGCGGTGATGAATTTAGTTGTTAGGCCTGCTCGGGGACCGATCGCTGGATACGGAGGCTGCCAGTCACCTGCCATCAGAGGAGTCGATTGGGATGGGCGTGGAATAGCAAAAGGAAAGGTTTCGCCTGTGCGGCGTTCCGCACGATTGGTGGAAGTGCTCTTCTCGGAGGAATATCATCATCTGCAGAGTGCTGAGAGTGCTGCTTGCAGCGTATGTGACGTTCACGCTGCTCCAGCTGAAATTCAATACCAGATGGAGATGATGAGGAGTCTCCGGCATGTGAACATCGACCATCTCCACGTCGGCTGGTATCAGTCCACGTACTACGGCTCTTTTGTCAGCCGAGCCCTGCTGGACTCGCAGTTCAGCTACCAGCATGCTATCGAAGAGTCTGTGGTGCTTATTTATGATCCCATAAAGACTGCGCAGGGCTCTCTGTGTCTGAAGGCCTACAGGTTGACCCCCAAATTAATGGAGATCTGCAAGGAGAAAGACTTCTCTCCGGAGGGGCTGAAGAAGGCCTGCGTCGGCTTCGAGCACATGTTCGAGGAAGTCCCCATTGTCATCAAGAACTCTCATCTCATAAACGTGCTCATGTGGGAGCTGCAAGAGAAGAGTACGGTGGCTGACAAGCACGAGCTGCTCAATCTGTCAAGCAG

Function

symbol description
eif3h Enables deubiquitinase activity. Contributes to translation initiation factor activity. Involved in negative regulation of proteasomal ubiquitin-dependent protein catabolic process and translational initiation. Located in extracellular exosome and membrane. Part of eukaryotic translation initiation factor 3 complex. Implicated in breast cancer; prostate cancer; and prostate carcinoma. Biomarker of prostate cancer.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_00250077_00273130.mRNA True 1886 mRNA 0.50 10 249756 273130

Neighbor

gene id symbol gene type direction distance location
CI01000027_00238851_00240657 NA coding upstream 8765 238851 ~ 240991 (+)
CI01000027_00229612_00237058 RAD21A, RAD21B, RAD21 coding upstream 11997 229005 ~ 237759 (+)
CI01000027_00122108_00124986 NA coding upstream 124770 122024 ~ 124986 (+)
CI01000027_00089337_00092919 NA coding upstream 156671 88779 ~ 93085 (+)
CI01000027_00000579_00037786 NA coding upstream 211904 579 ~ 37852 (+)
CI01000027_00365674_00371897 CSMD3 coding downstream 91860 364990 ~ 371996 (+)
CI01000027_00391159_00499309 CSMD3 coding downstream 117553 390683 ~ 499760 (+)
CI01000027_00505199_00523652 NA coding downstream 231140 504270 ~ 523652 (+)
CI01000027_00527282_00534071 NA coding downstream 253737 526867 ~ 535055 (+)
CI01000027_00637372_00642483 CTHRC1B, CTHRC1, CTHRC1A coding downstream 364242 637372 ~ 642642 (+)
G138115 NA non-coding upstream 2174 245883 ~ 247582 (+)
G138114 NA non-coding upstream 4448 244016 ~ 245308 (+)
G138107 NA non-coding upstream 31126 218387 ~ 218630 (+)
G138106 NA non-coding upstream 31412 218123 ~ 218344 (+)
G138155 NA non-coding downstream 370491 643621 ~ 645451 (+)
CI01000027_00681087_00701456 NA non-coding downstream 377059 681087 ~ 701956 (+)
G138207 NA non-coding downstream 400521 673651 ~ 718459 (+)
G138229 NA non-coding downstream 536527 809657 ~ 809941 (+)
G138233 NA non-coding downstream 541451 814581 ~ 814806 (+)
G138030 NA other upstream 149499 39146 ~ 100257 (+)
G138238 NA other downstream 556644 829774 ~ 831683 (+)
G138247 NA other downstream 582258 855388 ~ 893121 (+)
G138290 NA other downstream 722840 995970 ~ 999181 (+)
G138436 NA other downstream 1233831 1506961 ~ 1507816 (+)

Expression


Co-expression Network