CI01000027_00527282_00534071


Basic Information

Item Value
gene id CI01000027_00527282_00534071
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 526867 ~ 535055 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_00527282_00534071.mRNA
GCATAAAGAAGGTGAGATGGCTTCATGTATACGGACCACCTCGGTCTAAATTCTCCATGCGGTTAAGGCTGCAAGTGTAATCTATTCGTCACAACCTCTTTAGCGCAGAACGTCAGCGGTCACTCGACAAATAGCCCATCATCGAGATTCCAGAGTGGCTCGAGAGCGTCGCTCTGCTTGATTTAGGTCACCGCCGGTTCACAAAACTGCAATAGGTCTGATCTGTCTTGTTGTGTGGCCAGCTGTGGTTTCAGTATGATTAGGTGGACGGCAGCGAGGTGTGACCCAACTTTAACAGCGACGGCACTTCATCAGTAGACTCGATGAAGCTGCTGACAGTCATGACAGAGTTGAATGACATCCGTTGAAGACTCATGACGGAATGTCATAATGCCACCAGGAGCTGTAGGGAACAATGCGCTGTTATGCCTGTCATGCAAACCAAAATGTTCTAATGCAAATCCCTTTAGGGACCACGATTCCACCCCTGCTGAACACCACGTCCAACAACCTCTACCTCACCTTTCAGACTGACATGAGCGTTTCTGGAGCTGGTTTTCACCTGGAATACACAGCAATAGGTTTGGACTCCTGCCCAGAACCTCAAACCCCCAGCAATGGTGTGAAGGTGGGCGACCGCTACTTCGTGGGTGATGTTGTCTCATTCCACTGTGAGCAAGGATACACTCTAAAGGGAAGTGCATATATAACGTGCATGCCGGGGCCTGTCAGACGCTGGAACTACCCCGCGCCCCTCTGTCTGGCTCAGTGCGGCGGCTTCCTGTCCGACATGAATGGAGTCATCCTAAGTCCTGGCTTTCCCGGAAATTACCCCAGTGGCCTCGACTGCAACTGGACAGTTAAACTTCCTGTTGGCTTTGGGATTCACCTGCAATTTCTCAACTTCTCCACGGAGGCCGTGCACGACTACCTTGAAGTCCGTAGCGGGACGCTGGACTCGGGTTCGGTGATCGATCGGTTCAGTGGGCCTGTTGTTCCAGAATCGTTCTTCAGCACGACCCACGAGACCAGCTTCTTCTTTCACAGCGACTACTCCCAGAACAAGCCCGGTTTCCACATCACCTACGAGGGTGAGACGGATCAGACCTGCCCACGGCCATTACTTCCCCTGTCGATACGGACACACACCGCTGGATCCCTTCTCGCAATAACAGGATAGGGAATATAACCAATTGTTCTCTTTCAGTTCTAAGCCCTGTTCAAAGCAAGTCAGTCAATCTTAGCAACATCCACAAGCATTTTCTAGCCAGCTCCAAAACATCCAGAATGCTCTCCAAATGCAAAACTCGGACGAGTTTGTGGGTCGCCTGAACGACTGATTGGTCTTAACGAAAATCCCTGTATAATTAAGTTGCTTTTGGGAATGTGTGCATCAGTAGCTGTGGTGCTTTAAAGGGTATGAATTTAAAGCTGCAGCTTTTCTGAGAGGATTTGACCATGCAAACAACTACGGCACAGCAGTAAAAGCTAGCACTAAAAATATAACAGCTTCAACAAGATTCAAATAGACCTCTAAATCTAAGTGTTAAACTCTTCCCTTTTGTGCTATGGACATGAATAATGCCTCTAATTGTTAATCTTTCTGAGGAGAGGTGTGCTTTTACTTTACTACACTCTAAAAAAAAAAAAATAATGTGTTGTCTCAACAAAAAAAAATTAAGTTTGCATCAATTTTTTTGAGTTATGAGTGAATTTACGCTCAACCAACAAGCTACATTGAGTTAGAGGAACTTAATAATTTGTAGTATAAACACAAATTTTTAAGCTGATTACTCAAAAAAATTAAGTCGCTCCAACTAGCCCTGGAACCAATTATGCTGCCTTCATGTGCTCTCGGATTTATCGTAAATACGAGTTTCCTAGGTAAAAATTGCACAACGCCTTCCCATTTTGAAACTTGAATGCGATAAGTTCGTAATCACGACTTCAGAAGTGGAAATTATCAAATTTCCCATAGCACGTGAAGACAGCATTAATCTTATGATTAACATTATTATGTTAACAGAACTCTACAAAATAATGTTTCCAACTTAAAAAGTTTAATTAAAACAATAAATTAGAATTTTTAAATTGCAACCATGGATTTAATTAAGTTGTGGTAATAGGTCCCCTGAATTACTTACTTATTTTAGAGTGTAAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_00527282_00534071.mRNA True 2164 mRNA 0.44 5 526867 535055

Neighbor

gene id symbol gene type direction distance location
CI01000027_00505199_00523652 NA coding upstream 3215 504270 ~ 523652 (+)
CI01000027_00391159_00499309 CSMD3 coding upstream 27107 390683 ~ 499760 (+)
CI01000027_00365674_00371897 CSMD3 coding upstream 154871 364990 ~ 371996 (+)
CI01000027_00250077_00273130 EIF3H coding upstream 253737 249756 ~ 273130 (+)
CI01000027_00238851_00240657 NA coding upstream 285876 238851 ~ 240991 (+)
CI01000027_00637372_00642483 CTHRC1B, CTHRC1, CTHRC1A coding downstream 102317 637372 ~ 642642 (+)
CI01000027_00681087_00701456 NA coding downstream 146032 681087 ~ 701956 (+)
CI01000027_00738809_00739296 NA coding downstream 202949 738004 ~ 740394 (+)
CI01000027_00765527_00776450 MIOS coding downstream 230412 765467 ~ 776763 (+)
CI01000027_00779517_00795032 NA coding downstream 243899 778954 ~ 795389 (+)
G138115 NA non-coding upstream 279285 245883 ~ 247582 (+)
G138114 NA non-coding upstream 281559 244016 ~ 245308 (+)
G138107 NA non-coding upstream 308237 218387 ~ 218630 (+)
G138106 NA non-coding upstream 308523 218123 ~ 218344 (+)
G138155 NA non-coding downstream 108566 643621 ~ 645451 (+)
G138207 NA non-coding downstream 138596 673651 ~ 718459 (+)
G138229 NA non-coding downstream 274602 809657 ~ 809941 (+)
G138233 NA non-coding downstream 279526 814581 ~ 814806 (+)
G138030 NA other upstream 426610 39146 ~ 100257 (+)
G138238 NA other downstream 294719 829774 ~ 831683 (+)
G138247 NA other downstream 320333 855388 ~ 893121 (+)
G138290 NA other downstream 460915 995970 ~ 999181 (+)
G138436 NA other downstream 971906 1506961 ~ 1507816 (+)
G138515 NA other downstream 1129353 1664408 ~ 1676860 (+)

Expression


Co-expression Network