CI01000027_00738809_00739296


Basic Information

Item Value
gene id CI01000027_00738809_00739296
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 738004 ~ 740394 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_00738809_00739296.mRNA
CTATATATGTACCCTAAGCCCCTCAGGTGCCTTAGTTATGGGATTGAGTGGATGACTAAAAGTATTTCAGTACCCCGTTGCCTGGGCTACCCTGGGCTACCCTCGTGTCTGTTACGCGCCCTTTTTTCAAGTGCTCTGCTCTGATGCTCGGTCGTCCCCCTACGTAGCACGGCGTGATTATACTGTCCCCATAGCATCTTGTCTTATTAATAATCTATATTAATTAATAAGATGAACGACACAGTACTCGTGTAGTATCGCAAGGGAACGTACTCGGTTACTAACGTAACCTCGGTTCCCTTAGATACGGAACGAATACTGCGTTCCTTGCCGCGCTACACGCGAGACGCCTCATGCCGTCGCTTCAGTCGAATATAATCGATTTGCCATGGTGAGACAGCCGCTTATAGCCTGAGACCCCGCCCCTTTTGGCGGGCTCGAGTGGGCTCGCTCACCATTGGCTTGTGCGTTCCGCGCCGTCATTGGTTCATTTTCTTAATTTTTACGAACCAATGCACGAGCAGTTAACACTGCGTGATTGTATAAAGGCTTCAGAATCGGAGAAAAATAAGTTTTCCCCATAGCGTCTTGTTTTATTAATAATCTGTATTAATTAAGACGAACGACGTAGTACTCGTTCTGTATCTAAAGGAAACGAGGTTACGTTGGTAACCGAGTACGTTTTTGTAACATTTTAAAAGTCTTTACTGTCACTTTTAATCAAATTAATTCAAACTTCTGCTTGAATTTCCCAGATGAGCGGGCACAGTCCCTGTATTCCCATGTGCGTGTGTTGTGTTGGGTCATGACGAGGCCTGAAAATCTGCAGAAAAAGCTCCAGCACATTCGTGCCACCTGGGCTAAACACTGTAACCAGGTGCTGTACATGAGCTCGCAGAGCTCCGACTTCCCCACCGTGGGGCTCAACGTCAGCGAGGGCCGATCTCAGCTGTACTGGAAGACCATGCCAGCATGCCGACTGCCACAAGTTCCGGCCGTTCGTACATCAGGGTTACATGAGCGGAGGTGCCGGATACGTTCTGAGCCGAGAGGCTCTCAGGAGATTTGTGCAAGGTTTCAGCCTGGGACGCTGCAAGCATTTCAGCTCCGTGGAGGACATGGCCTTGGGAAGGTGCATGGAGACCATGGGAGTGAAGGCTGGGGATTCAAGAGACCCAAACAAACGAGAAACATTTAATCCTTTTAGACCGGAAAACCATCTCATTCCCCCAAAGAATGGAAAACAGACCTGGGGCTACAGTTACTACAAAACCAGACGGATGAATGCAGCTGGCAGTTTTTCATTGAAAATATTTGTGAGTCATTCTACAGTTAAACCTAAGCTCTGCCCTCCTTGATTACTGTTGCTAATACTGTGTAACACTGGGTAAGACGCAACAAAAGACAATAGAGTGCAACAGCCCGCCCTCTTTTTCAGCGGCATTGGTTCCTTTCATTTCTCCCATAGGGATTTCAAAAAAGTCTTCATTACTGCATTATAAGCCATGAACCAAGCTAATCAGCCATGAGATGAATAATAACATTACAAACTTTGATTTGAAGCAAAACAGTTTTTAAAATTAGACAAAGGTACAAGACTGTACTTAACGTTTTTAGTGAGGGAGAAAAAACTACAATCCCATGAAGCATTGAGAAAAGCATAATCAAATTAAAAATGTTGATTAATATATATAAACTTAAAGGCCCGCTGAAGTGTCTTGGAACGCGCAGAATTATTCAATGTGTTGACGTAATTTCAACTGTAACAGGAAGACAGACTGTGCTCGCGCTGCGGCGGTTCACGATATACTAATGCGAAAACGGACTTCATTCGCGTCAATGGAAACCATATTTACACTGTCTGAATCGTTCTCTATCCCCTATATAGTGCACTATGTGCCATTCACCATGTAGAAACTAGTAAACGTGTGAACAAATGACCAATTTCAGCCACAGCTTCAGTGTCTGTTGATAGTGTAGGAGGGGCGAAACTTCAGATTCCAGAGAGAATTTGATTGGACAGAAGATTTGATGAGAAGCTGAAGTACGATGTGATGTCATGAAAATCCGTGATCCATTTTAGCGGAAGTGAGAGACTAAGTTTTGAATGCTAATATCTCCTAAATTCGAATTTTGTCATTGTTTTGGAACTTACCAGCTTATTCATAATATTAAGGCTAACATATTCATACTAAAATCTAAAAAACTTACATTTGATTTCAGGGGGACTTGAAAATTTAATTATAATCCTTGACAAAGAAGTTGTAACAATGATGTATTACTACTTTTATGTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_00738809_00739296.mRNA True 2296 mRNA 0.43 2 738004 740394

Neighbor

gene id symbol gene type direction distance location
CI01000027_00681087_00701456 NA coding upstream 36457 681087 ~ 701956 (+)
CI01000027_00637372_00642483 CTHRC1B, CTHRC1, CTHRC1A coding upstream 95362 637372 ~ 642642 (+)
CI01000027_00527282_00534071 NA coding upstream 202949 526867 ~ 535055 (+)
CI01000027_00505199_00523652 NA coding upstream 214352 504270 ~ 523652 (+)
CI01000027_00391159_00499309 CSMD3 coding upstream 238244 390683 ~ 499760 (+)
CI01000027_00765527_00776450 MIOS coding downstream 25073 765467 ~ 776763 (+)
CI01000027_00779517_00795032 NA coding downstream 38560 778954 ~ 795389 (+)
CI01000027_00909268_00918831 NA coding downstream 168119 908513 ~ 919213 (+)
CI01000027_00949578_00953698 NA coding downstream 208327 948721 ~ 954281 (+)
CI01000027_00980123_00987611 NA coding downstream 238761 979155 ~ 987884 (+)
G138207 NA non-coding upstream 19545 673651 ~ 718459 (+)
G138155 NA non-coding upstream 92553 643621 ~ 645451 (+)
G138115 NA non-coding upstream 490422 245883 ~ 247582 (+)
G138114 NA non-coding upstream 492696 244016 ~ 245308 (+)
CI01000027_00238851_00240657 NA non-coding upstream 497219 238851 ~ 240991 (+)
G138229 NA non-coding downstream 69263 809657 ~ 809941 (+)
G138233 NA non-coding downstream 74187 814581 ~ 814806 (+)
G138234 NA non-coding downstream 75600 815994 ~ 821269 (+)
G138247 NA non-coding downstream 118948 855388 ~ 893121 (+)
G138267 NA non-coding downstream 193349 933743 ~ 934498 (+)
G138030 NA other upstream 637747 39146 ~ 100257 (+)
G138238 NA other downstream 89380 829774 ~ 831683 (+)
G138290 NA other downstream 255576 995970 ~ 999181 (+)
G138436 NA other downstream 766567 1506961 ~ 1507816 (+)
G138515 NA other downstream 924014 1664408 ~ 1676860 (+)

Expression


Co-expression Network