XLOC_008511


Basic Information

Item Value
gene id XLOC_008511
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 24312556 ~ 24313122 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018958
GTGTGTTCTGCTGTCAAAAAGAAGTGGTAGGCCTACTTGATCAGATGGAGAAACCTGCTGTTCACATTTCAAATAGGCTAACTTACACAACGAGGTAATGTCAATATATTTTATCCAGCAATAGAGCTTTATGTCTGTAAGATTTAATATGTGTAATATTGCTCATGAAATGTTTTGGATTGTATCATGATTTAGTCGTGACCGTGAGAGTATGCTGTTTTcagctatatttacattacattttcaatCACACTAACATAAGTTGTTAAAtaacatttatcttttttatatCAGGCCACGATGCTGATAAAAGTGCAATTTGGAggcaagaaaaaatatattaaactggaAGAAGATTGTTTCTTGGATTTTTTCAGTGCGGGTGAGTTTTAGTGTAACAaagagtatttttaaaaatatataataataataataataataataacagtcattttgaaatttatttgataaattataCATTGTTGTTATGTTGTAGTCCAGCACAAGTTTGTGATACCAGAGGATACAGCATCGAAAGTCACAGATGACCATAGCATAGAGGTGGAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018958 True 567 lncRNA 0.31 1 24312556 24313122

Neighbor

gene id symbol gene type direction distance location
XLOC_008508 NA coding upstream 106575 24179932 ~ 24205981 (+)
XLOC_008509 NA coding upstream 114059 24191710 ~ 24198497 (+)
XLOC_008507 NA coding upstream 150456 24149968 ~ 24162100 (+)
XLOC_008506 NA coding upstream 179719 24132554 ~ 24132837 (+)
XLOC_008504 myo18ab coding upstream 191635 23947932 ~ 24120921 (+)
XLOC_008512 phf12b coding downstream 235932 24549054 ~ 24563042 (+)
XLOC_008513 dhrs13b.1 coding downstream 250382 24563504 ~ 24569062 (+)
XLOC_008514 dhrs13b.1 coding downstream 259804 24572926 ~ 24601091 (+)
XLOC_008515 NA coding downstream 303448 24616570 ~ 24618644 (+)
XLOC_008516 smtnl coding downstream 330894 24644016 ~ 24671419 (+)
XLOC_008463 BX663520.1 misc upstream 3060274 21252191 ~ 21252282 (+)
XLOC_008505 NA non-coding upstream 307273 23999569 ~ 24005283 (+)
XLOC_008522 NA non-coding downstream 528169 24841291 ~ 24844913 (+)
XLOC_008523 CR942805.1 non-coding downstream 649014 24962136 ~ 24962252 (+)
XLOC_008524 NA non-coding downstream 694433 25007555 ~ 25053314 (+)
XLOC_008525 BX908796.2 non-coding downstream 715360 25028482 ~ 25054730 (+)

Expression


Co-expression Network