CI01000027_00909268_00918831


Basic Information

Item Value
gene id CI01000027_00909268_00918831
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 908513 ~ 919213 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_00909268_00918831.mRNA
GTATGAAACACCCCGCGATATATTTTGTGTATTTGCCCACCTTTGTCGTGTCCTACCGCCAAAAAATACATGACTTGGTAATAAAACCAACATATTGTTTGCCTGTTTAAGATTGTTAATGTTATTAGAGCAGAATTGTTTGAGGTTAGCTTATAGTTTTAACCTATAGGCCTAACTCTAGCTATTCTTCCGTCTTAACGCGCCGCTCGACCGTATAGAAGCCAGTCAGACTCGACTGAACGAAAGGTGTTCATCTATAATATATTTACATAGGACAAAAATGGGTAAAAACCAGCGTATTTTGTGCGAACCGGCACTTATATTAACGACACTTGAATCTCGACTGTGAAACAGACTTACAAAATCAGACTTTTCAACTAGTCTGACCGTGTTCATGCGGTACGCGAGAGCCGCGTCGCGCCTACATTTCACGGGCGCAGGGGTTGTACTTTTAACACGTCTCATAATCTGTTTGAAATTGATTTTTTTTATTTGTATTTTTACTAAGTGATAGATACAACGTCATTTTAGTGTTGATGAGATCTAGCCTCGAACGCACGCTGATCTGTCCTTTCAGACTATGAGTTGGATGAGGATGAAGAGAAAATGATCAAACCGGATCAACTTCAAGCGACACGGTGGTGTAAACTATAGAAGCAGTGCCACGAATGCTATCAGCAGCCTTTGACTACAGAAATGTAAGTATAATATTAAGGTTTTTTTTACTTAATATGTACCTTAGTAACAATGTGAATATGTCACTGCCTGCTGTTGTTGTCATTCCCCATTTCACAGAGATCTTCAGACCAGACTCGACAAAGAAACATGTCAGTAATCCTCCTAGGTTACAATATACCCTTTCCATAAGGATCTGGAAGATGGCTATTCCCTCAGACATAAACTCAGTGGAGCTTGCACCTCTGGTTCTTGAAGATGAGGTTTATAAAGAGGATTTCGAGACTGGTGGTCTGCTAACGGGAAGAGAGGAGATGCCAGCTGCCATGATAAAAGCTTCAGCCTTAAACGGAAATTACAAAAGGAGAAAGGATGAAGCAAGTATATCATGTCCATGTGGGAAAGTCAGCAAAGAGGAGATCAGTTCCTTCAGGCTCTGCCAAAGCTCTCTGAGGAAAATTCATTTATTCAGCATGGCTACGAATCCATACTCAGCAGGCAGAGATGAGAAGTCACAGCAGGACCACACACCCCTCCGTACAGCTGTAAATATTAATACGGAGCCCGTGCGCAGCGCTTTGTTGATGCCGATCTGACATGCCACCTTCATGAGGAACCTCCCTTGAGGCGGCTGGGAAGCGAAAAGAGGTTTTACTGCCACAGAAGAGCCAGACTCGAGCAATGTGCCCTTTAGATAAAAGACATTAAGTCTGGGGTCTGGACCATGAGTGGCTTTGGGTTGTAAACTGTGAGATGTTGTTCTGGGGGGAGAATGTTGCATCTACTGTATATAAAGAAAAACCTGCAGCTATGTAAGGACAAGATGGCAGAAACTTTACCGGGCGCTGAACATGATGACTGTGAGCATGAAGCATTCAGAAAGACTAAATTCTAACTTCAAAAATGTTGGATTTACTTAAATATGAAATTGAAAAAAAATGGTTCCAGCTATATTAAGTACTCATTCACATACTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_00909268_00918831.mRNA True 1653 mRNA 0.42 7 908513 919213

Neighbor

gene id symbol gene type direction distance location
CI01000027_00779517_00795032 NA coding upstream 113124 778954 ~ 795389 (+)
CI01000027_00765527_00776450 MIOS coding upstream 131750 765467 ~ 776763 (+)
CI01000027_00738809_00739296 NA coding upstream 168119 738004 ~ 740394 (+)
CI01000027_00681087_00701456 NA coding upstream 206966 681087 ~ 701956 (+)
CI01000027_00637372_00642483 CTHRC1B, CTHRC1, CTHRC1A coding upstream 265871 637372 ~ 642642 (+)
CI01000027_00949578_00953698 NA coding downstream 29508 948721 ~ 954281 (+)
CI01000027_00980123_00987611 NA coding downstream 59942 979155 ~ 987884 (+)
CI01000027_01033975_01037549 NA coding downstream 113690 1032903 ~ 1037922 (+)
CI01000027_01045587_01050470 MEX3A coding downstream 124179 1043392 ~ 1050863 (+)
CI01000027_01089832_01104918 NA coding downstream 170619 1089832 ~ 1104980 (+)
G138247 NA non-coding upstream 15392 855388 ~ 893121 (+)
G138234 NA non-coding upstream 87244 815994 ~ 821269 (+)
G138233 NA non-coding upstream 93707 814581 ~ 814806 (+)
G138229 NA non-coding upstream 98572 809657 ~ 809941 (+)
G138267 NA non-coding downstream 14530 933743 ~ 934498 (+)
G138277 NA non-coding downstream 49728 968941 ~ 969167 (+)
G138300 NA non-coding downstream 65244 984457 ~ 984699 (+)
G138309 NA non-coding downstream 84780 1003993 ~ 1004346 (+)
G138311 NA non-coding downstream 93664 1012877 ~ 1013154 (+)
G138238 NA other upstream 76830 829774 ~ 831683 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 479837 390683 ~ 499760 (+)
G138030 NA other upstream 808256 39146 ~ 100257 (+)
G138290 NA other downstream 76757 995970 ~ 999181 (+)
G138436 NA other downstream 587748 1506961 ~ 1507816 (+)
G138515 NA other downstream 745195 1664408 ~ 1676860 (+)
G138915 NA other downstream 2565174 3484387 ~ 3486647 (+)
G138953 NA other downstream 2582859 3502072 ~ 3520065 (+)

Expression


Co-expression Network