CI01000027_00949578_00953698


Basic Information

Item Value
gene id CI01000027_00949578_00953698
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 948721 ~ 954281 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_00949578_00953698.mRNA
GTATGAAAATCAGGGTCACTCGGGGTGACATTAAAATGCATTCCCTGAAATGAGTTCGAAATTTCACCCGGCACATTTCCTTATCTGCCTCTCAGAATGAAGGTGACAATTAAGTCACCTACATTTTTTCCCCCCCATTTAATTTTCTTGAAATAACACTTCTGTCTTTAACACACACTCCACTTTCAATAAAGCCTCATATTTTGAGATGAGGAATCTTCAAACACCTACAAAACCTCTTAAAACAGCAATTATTTGGAATATAAGTGACCTTTGATCCCATGCCCTTAGTCTGAACTCGATAAACTTCAAAGCATTTGGAAAACCACAAAGTCTATGTGGACATACCAGACGTAAAGCATGTACAATGAGCCAATGTGGGTGTGTGTGTTTGGAGGAGTGAAGCTCTTAACAGAATGCAACCTGCATGCTCCTGCTTCATTAACAAGCCTTATTATAGAGGCAACGTGGTGTGAAGTGTGAGTAGCTCTGACAGCACAACTTTGTTCTCGAGGGATTGTGTGATCAAGAGACAAAAGGAGAATCCTGCGTAATCTGGGTAATCTCTGCTCTAAGAGTGGATAAACCCTGCTGGGCCACACACAAGAGTTCAGCCATTAACCATTCCTATTGGTTGTGAGTATAGCCAATATGTTAGCCTATACCATGTCATAAATAAACATGAACCAGTACAAGCAAAATATTATATAATATTAAACATTAAATATGTAAACTTGCCAAAAAAAATAAAAAAAATAAAAAAATTAAAACACCAGCGAATGCCACCTTCTTTATGTAAAAGAGTACCAATCATTTCATAATAGCATAGCTTAGATGTTACTTATGACTCATAGAACATGGGTATTATTCTCAAGGATTCATTACGAAACCAGGAGAACGTTGCTGCTTTTAAGCAGAATACACTGTATGTGGTCTCTAAGTTTGGCCACAGCTGTTTTGAAGTCAGAGTGAAGACCTCTACTTGTCCTTTTTCATCACACCAGATAATAAATAAATTACAATGCAACTTTGTACAGACAGAGGACGCCTGGAACCTTCATATCCCAATTGATATCCATCAAGGTACTTATGGAAATAGCCATATACCTGTTTCCCAGAAGTACAGCGACTTCCCGTCTCCTGTCGTTTGGGAGCAAACGGTCCAGATTCCACAGAGCAGTAAAAATAACCTCCGTAAACACAGGAACGCTGTCCTTGCACCCCTAACCCCAAGTCCCATGGCTCCCCTGAATCGGGTAAAATCCACTTGGTCGGGAGGAAGAGAAACCCCAATGAGAGCAGAGAAAGAACTTCAGTCGCACAGACTGAAAGAGTTTGCGTGCCTCTTCAGTTAGTGTTCCCCGAAGGAACAGTGCATGTGGCGGATCTCCTCGTCTTCTGCTCCTCTGGTTGGCTGGAGCGAAAAGCAGAAAGCTTTGGCTGAACAATAGAGAACGGCAGCCACAGTTACCGGCACTGCTGCTCACTGCTGCCGCTGTCCTCTGCCTACTGCAGCTGACTGACGCCGCATCTCCCCTCCCTCTGCCTCACACTCTCTCGCTCACTCACTCTCTCTCTCTCTCTCTCTCTCTCTTCCGAGCTTAGGGCACAAGGACGCTCCTTCGCCATGCTCCTGTGACGCTAAAGAAGACAAGATAAGAGGGGAGTGCTGTCGCTAAGGGAGGGAGGGAGAAAGAGGGAGATTTATGAACTGCATATTGCACATTTTCTGTGTCTGCGTGTAAGATTATTTTTATTTTTCCTGTGCCTCATTCTCAGTTTGTCTTTTTCACTCATTGAATGACATAGGCCTATGCGAAAAGAGTCATGAACATGAAGCCAATCCGTTCACAAAACCTTCTCAACTTTTACTTCTATACTTGGCTTTTATCCATGTTCAGGGGGTGGTGTAGCAACTGTAACAACTGTCCAATGAGA

Function

NR:

description
PREDICTED: thrombospondin type-1 domain-containing protein 7A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_00949578_00953698.mRNA True 1938 mRNA 0.43 2 948721 954281

Neighbor

gene id symbol gene type direction distance location
CI01000027_00909268_00918831 NA coding upstream 29508 908513 ~ 919213 (+)
CI01000027_00779517_00795032 NA coding upstream 153332 778954 ~ 795389 (+)
CI01000027_00765527_00776450 MIOS coding upstream 171958 765467 ~ 776763 (+)
CI01000027_00738809_00739296 NA coding upstream 208327 738004 ~ 740394 (+)
CI01000027_00681087_00701456 NA coding upstream 247174 681087 ~ 701956 (+)
CI01000027_00980123_00987611 NA coding downstream 24874 979155 ~ 987884 (+)
CI01000027_01033975_01037549 NA coding downstream 78622 1032903 ~ 1037922 (+)
CI01000027_01045587_01050470 MEX3A coding downstream 89111 1043392 ~ 1050863 (+)
CI01000027_01089832_01104918 NA coding downstream 135551 1089832 ~ 1104980 (+)
CI01000027_01119958_01123077 NA coding downstream 165149 1119430 ~ 1123099 (+)
G138267 NA non-coding upstream 14223 933743 ~ 934498 (+)
G138247 NA non-coding upstream 55600 855388 ~ 893121 (+)
G138234 NA non-coding upstream 127452 815994 ~ 821269 (+)
G138233 NA non-coding upstream 133915 814581 ~ 814806 (+)
G138229 NA non-coding upstream 138780 809657 ~ 809941 (+)
G138277 NA non-coding downstream 14660 968941 ~ 969167 (+)
G138300 NA non-coding downstream 30176 984457 ~ 984699 (+)
G138309 NA non-coding downstream 49712 1003993 ~ 1004346 (+)
G138311 NA non-coding downstream 58596 1012877 ~ 1013154 (+)
G138312 NA non-coding downstream 60763 1015044 ~ 1015245 (+)
G138238 NA other upstream 117038 829774 ~ 831683 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 520045 390683 ~ 499760 (+)
G138057 NA other upstream 851994 93559 ~ 96727 (+)
CI01000027_00089337_00092919 NA other upstream 858844 88779 ~ 93085 (+)
G138290 NA other downstream 41689 995970 ~ 999181 (+)
G138436 NA other downstream 552680 1506961 ~ 1507816 (+)
G138515 NA other downstream 710127 1664408 ~ 1676860 (+)
G138915 NA other downstream 2530106 3484387 ~ 3486647 (+)
G138953 NA other downstream 2547791 3502072 ~ 3520065 (+)

Expression


Co-expression Network