CI01000027_01033975_01037549


Basic Information

Item Value
gene id CI01000027_01033975_01037549
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1032903 ~ 1037922 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_01033975_01037549.mRNA
TTTTAAATATAATGTCTTAAAAATGACAAAATTACAGTTGCTAAGTTGCTAATGATTTGAGGTTTGTCAGAGTGGACAAGGAAAGCAAAAATCATGCTGGATGAATTTCAAGAACAAGAGGGACAACATTTTTTACATTTTTCCTGTAGCTAGTGCTTGAAGCTTAACATAGTTTACAAGTTTAACATATATATATCTCCTCCTGACTACCAGCTATGGAGTTTTGTCCTCTGTAGAGGACATTATATTTTAGCAAATTTCTCTTGTCACAGTTTGGATGTCCTGTAAAGAGCTCCCTCTCCTTGGTCTATAAAAATGGCTGACATTAATTTAATGATCAAATTTAACACCCTTTTGGAAATATGATAAAATTTTGTTATTATCATTTACATCTGACTAATTTTCAAATTGTTTGTCATAAATCAACATCTCAAGAAAATGTTATGGGGTTTTAAATCAAAATATGACTTTCTGTTACGAAACAGGACATCGATTTTATACATGTCCACTGTAAAGGACAACATGACTTCAATCATATTTATCAGGCATTTTGGGAGACACAACAAGTGAATAGGAAAAGAAATTGTTGCTCCAAGAACACATTAATATGAAAATTATATACAGTGTGTGGATACATTGTATATAATGGGAAAAAAAAAAAAAAACATTTACGGCCATTTTACACACATATTGCATAAAGCAAAATGGTATATCAAATCATTCTGTTATATCTTTCATAACATAGTTGAGATTCACCTTCATACAAAGTTTGGAATAAAAAATACTAAAACCTAAACATTGAATAAAATATAATTTTTTAAAGAATGTTATTTTTCCATTTTTTTCTTATGCTCTAAACAATGACATAAAAAAATACTAAATTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCACATGGTCTTTGATGTAGATTATAATGTAGGCCTATATGGATGATACATTTCTCAGCAGTAATACAAATAAATTTAATTATTACAATAAATTAATAAAACAATGAATAAATCTGAATTTTTAATTGTTTCTTCAGATGGCTTTTTCAGTTGCTACTTATGGTAAAGGAAACTTTGGAAAGGTGTATAAAGTAACCTTTGGAAGTACCTGTGTGGCTCTTAAGAAGCTAACAAAGCCTGTCATAATCACCATTATCAATGGCATGTGTGAAGGCCTCGCTTACATGCACAGCAAGAATATCGTCCATCAGGACCTCAAGCCTGACAACATCATGGTGGAACACAACACTTATAGGGCCGTCATAATTGACTTAGGACTTGCCAGATTTCAAAAGAACGGGCTTTGCTTTGGTGCAGAAGGAGGCAATTGGTGTTACTCTGCTCCGGAGATTTTCCAAGGAAAATACAGAGACCAGTACTCTGATGTGTGGGCGATGGGGAAAATTATAGCAGAGCTCCTGATCGTGCCCAGAGCGAGACTCCCTCCGACCATCACCACTCTTCATGTGATTGCAGCCATGAATATGAATCCATATGCTTTCCCGGTCTCTAGAATGGTTAACAAACTTGTTTTATTCAGACCTGCGATGGCGCAGATCTTAGGACAGATTGATCAGGCAGGGAGAAAGTGGATTTTGTATACTTGCCTTTTTGGGAATGTAGGAATGTAGCTATTTAAAAGATTCTCTAGAAGCTTAGATTTGGCAATGAGTTTATTACTGACTGACGAACTTCACTAACACATTTGTTGTGTTCATGTGCCAGTTGCTCTACTCAACTCGATGAAGTGTAAATCTCAAGAAAGTAAATGACAACAATTACTAAAAAAAAAATGCATTAAGAAACATCTTTCAGGTTGTGAACTGTAATCCTATGGCCAACAATCAAAAGAGGCCAAATGTTTTTTAAGTGTATTTTTGGATGTTGAGAATATACTGTAGTTTTACTGTCCTTTTTGCAGAGATTATATGTGATGATATAGATTTGATATTTTTTTTTCTTTGTTATATATTATTTAATTATGATCAGTGTCAGTTCAATAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_01033975_01037549.mRNA True 2039 mRNA 0.34 3 1032903 1037922

Neighbor

gene id symbol gene type direction distance location
CI01000027_00980123_00987611 NA coding upstream 45019 979155 ~ 987884 (+)
CI01000027_00949578_00953698 NA coding upstream 78622 948721 ~ 954281 (+)
CI01000027_00909268_00918831 NA coding upstream 113690 908513 ~ 919213 (+)
CI01000027_00779517_00795032 NA coding upstream 237514 778954 ~ 795389 (+)
CI01000027_00765527_00776450 MIOS coding upstream 256140 765467 ~ 776763 (+)
CI01000027_01045587_01050470 MEX3A coding downstream 5470 1043392 ~ 1050863 (+)
CI01000027_01089832_01104918 NA coding downstream 51910 1089832 ~ 1104980 (+)
CI01000027_01119958_01123077 NA coding downstream 81508 1119430 ~ 1123099 (+)
CI01000027_01134221_01143363 NA coding downstream 94235 1132157 ~ 1143526 (+)
CI01000027_01148208_01150893 NA coding downstream 110136 1148058 ~ 1150917 (+)
G138289 NA non-coding upstream 7963 1021521 ~ 1024940 (+)
G138312 NA non-coding upstream 17658 1015044 ~ 1015245 (+)
G138311 NA non-coding upstream 19749 1012877 ~ 1013154 (+)
G138309 NA non-coding upstream 28557 1003993 ~ 1004346 (+)
G138300 NA non-coding upstream 48204 984457 ~ 984699 (+)
CI01000027_01176638_01185141 NA non-coding downstream 141988 1175836 ~ 1185307 (+)
G138350 NA non-coding downstream 176526 1214448 ~ 1214747 (+)
G138355 NA non-coding downstream 180731 1218653 ~ 1218878 (+)
G138357 NA non-coding downstream 182950 1220872 ~ 1225465 (+)
G138298 NA non-coding downstream 197937 1235859 ~ 1236549 (+)
G138290 NA other upstream 33722 995970 ~ 999181 (+)
G138247 NA other upstream 163328 855388 ~ 893121 (+)
G138238 NA other upstream 201220 829774 ~ 831683 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 604227 390683 ~ 499760 (+)
G138057 NA other upstream 936176 93559 ~ 96727 (+)
G138436 NA other downstream 469039 1506961 ~ 1507816 (+)
G138515 NA other downstream 626486 1664408 ~ 1676860 (+)
G138915 NA other downstream 2446465 3484387 ~ 3486647 (+)
G138953 NA other downstream 2464150 3502072 ~ 3520065 (+)
G140436 NA other downstream 3699476 4737398 ~ 4774262 (+)

Expression


Co-expression Network