CI01000027_01089832_01104918


Basic Information

Item Value
gene id CI01000027_01089832_01104918
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1089832 ~ 1104980 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_01089832_01104918.mRNA
CGCAGCAGCATGTCTCTGACAGTGTCTCAGGGTGAGGGTTTGACAGTCATCACCATCACCTCAAACCCAAAGAGCAAATGGCCCGTACTGTGTCAGATTCTGGGTTTTCTGTGTAACAGTCCAGGGTGTTTTGCACCTCAGCATATGAAAGGGAATCTGAAGGACGTCCACATAGCACTTGGAATTCTGCAGTTGATAGTTGGTGTCATCAATATTGTGGTGGGGATTGTGCTTACATGCACTGGGTTGTACTGTAGCATGTCCAGAATATGCCAGGGACCTTCTTTGCTTGGTGGTATGTTCCTTGTAGCTGGAATTGTGTGTATTCTTGGAACCAAGTTTACCAGTTCTTGTCTGCTGATAATCGGGATGATTCTGAATGTAGTCAGTGCTGCACTGGCTATCACAACTGTTGTGCTGTATTCAGTGGACCCTGCAAATGATCATACTGAATACTATAAAACCTCCAATTATTATTATTCATATTGTGATGACCATAATGGAACACCTTTCCCTGAAGATATTAAAAGAAATGAGGTCTGTTTGTACTACAAAAATCTCAATAAGTGCTGTACTGCTATCACAGCTGTTGTGCTGTATTCAATGGACCTGGCAAAGGAAATAGTCCCAAGTCCGGTGGTCCCAGCAGCTCCAAATTCAGTGGTCCCAAGTCCAGTGGTCCCAGCACCTCTAAGTCTGGTGGTCCTAATGCCCCTAAGTCAGGTGGATCCAAGTCTACTAGTCCCAGCACCTCCAAGTTCGGTGGTCCCAAGTTTGGTGGTCTCAAGTCCGTTGGTCCCAGCACCCAAGTCCAGTGGTCTTAAGTCCGGTGGTCCCAGTGCCCCTAAGTCGGGTGGTCCCAAGTCCAGTAGTTCCAGTACCTCCAAGTCCGGTGGTCTCAAGTCCGTTGGTCCCAAGCCTGGTGGTCCCAGTGCCCCTAAATCGGGTAGTCCTAAGCCCAGTAGTCCCAGTACCTCCAAGTCTGGTGGTCTCAAGTCGGTTAGTTCCAACGCCTCCAAGTCCAGTGGTCCCAAGTCTGGTCGTCTCAAGTCCAGTGGTCCAAAGTCTGGTGGTCCCAGCACCTCCAAGTCCGGTGGTCCCAGCACCTCCAAGTCCGGAGGTCCCAGTGCCCCTAAGTCGGGTGGTCCCATGTCCAGTAGTCCCAGCGCCTCCATGTCCAGTGGTCCCAAGTCCGGAGGTCCCAGCACCTCCAAGTTTGGTGGTCCCAGTGCCCCTAAGTCGGGTGGTTCCAAGTCCGTTGGTCCCAGTGCTCCCAAGTCCGTTGGTCCCAGTGCTCCCAAGTCCAGTGATCCCAGTGCTCCTAAGTCAGGTGGTCCTAAATCCAGTAGTTCCAGCGCCTCCAAGTCCAGTGGTCCCAGTGCCCCTACGTCCAGTGGTCCCAAGTCCAGTAGTCCCAGCGCCTCCAAGTCCGGTGGCCCAGTGCCCCTTAGTCGGGTGGTCCCAGTGCCCCTAAGTTTGGTGGTCCCAAGTCTGTTGGTCCCAGTGCCCTTAAGTCCAGTAGTCCAGAGTCCAGTAGTCCCAGCGCCTCAAAGTCCGGAGGTCCCAAATCCGGTGGTGCCTCCAGTCTGGTAGTCCCAAGTGTTCTTTCTTTCTTTAGTGGTATCAGAACAAGAAACAGTTCTGTACCCAATCGA

Function

NR:

description
Membrane-spanning 4-domains subfamily A member 8A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_01089832_01104918.mRNA True 1655 mRNA 0.52 6 1089832 1104980

Neighbor

gene id symbol gene type direction distance location
CI01000027_01045587_01050470 MEX3A coding upstream 38969 1043392 ~ 1050863 (+)
CI01000027_01033975_01037549 NA coding upstream 51910 1032903 ~ 1037922 (+)
CI01000027_00980123_00987611 NA coding upstream 101948 979155 ~ 987884 (+)
CI01000027_00949578_00953698 NA coding upstream 135551 948721 ~ 954281 (+)
CI01000027_00909268_00918831 NA coding upstream 170619 908513 ~ 919213 (+)
CI01000027_01119958_01123077 NA coding downstream 14450 1119430 ~ 1123099 (+)
CI01000027_01134221_01143363 NA coding downstream 27177 1132157 ~ 1143526 (+)
CI01000027_01148208_01150893 NA coding downstream 43078 1148058 ~ 1150917 (+)
CI01000027_01153787_01158632 NA coding downstream 48807 1153787 ~ 1159001 (+)
CI01000027_01162273_01168513 NA coding downstream 57293 1162273 ~ 1168657 (+)
G138289 NA non-coding upstream 64892 1021521 ~ 1024940 (+)
G138312 NA non-coding upstream 74587 1015044 ~ 1015245 (+)
G138311 NA non-coding upstream 76678 1012877 ~ 1013154 (+)
G138309 NA non-coding upstream 85486 1003993 ~ 1004346 (+)
G138300 NA non-coding upstream 105133 984457 ~ 984699 (+)
CI01000027_01176638_01185141 NA non-coding downstream 74930 1175836 ~ 1185307 (+)
G138350 NA non-coding downstream 109468 1214448 ~ 1214747 (+)
G138355 NA non-coding downstream 113673 1218653 ~ 1218878 (+)
G138357 NA non-coding downstream 115892 1220872 ~ 1225465 (+)
G138298 NA non-coding downstream 130879 1235859 ~ 1236549 (+)
G138290 NA other upstream 90651 995970 ~ 999181 (+)
G138247 NA other upstream 220257 855388 ~ 893121 (+)
G138238 NA other upstream 258149 829774 ~ 831683 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 661156 390683 ~ 499760 (+)
G138057 NA other upstream 993105 93559 ~ 96727 (+)
G138436 NA other downstream 401981 1506961 ~ 1507816 (+)
G138515 NA other downstream 559428 1664408 ~ 1676860 (+)
G138915 NA other downstream 2379407 3484387 ~ 3486647 (+)
G138953 NA other downstream 2397092 3502072 ~ 3520065 (+)
G140436 NA other downstream 3632418 4737398 ~ 4774262 (+)

Expression


Co-expression Network