CI01000027_01119958_01123077


Basic Information

Item Value
gene id CI01000027_01119958_01123077
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1119430 ~ 1123099 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_01119958_01123077.mRNA
AAATAAAACTCTGCCTTAAAAAAAAAAATCCCACAGGGAGTCGTGCCATCTTTATTCTGGACTGAGACTCGCATAGACGTGCCATACAAGGTGAGTTTGAGTTAACAGTGTTTCTTAAGATAATATAATGAACTTAAAAAAATAAATAAATAAAGACAAAAAAATTAAGGACAATAATTTTAATATTAATGAACAAACTGAGCATGGTTAAACAGCCTGTAGCACCACAACTTCTTTATTAGAAACATAAGCCGCTGGATTTTTGCAGTTTCCTCCTCCTAACTTTGATTCAGGTCTAAATTTGTTTTGATAAATAATCATATTCATCTATTGTATTTACATACTATTATTATAATTTAAAATCTATTTAAAGTGTTAAATGTCTATGCTTCGTATCCTCCAAACCTGATATGAATTTATGTACAAAAATGATGAGCAGTAATCATTTTTTGTCCTTATCGTTTCATGCAGTTAAACAAACAGGAGGTTCAGCCATTGTTACCTGTGGGAAGATTTGTCTGCAGCATCATGTCTCTGACAGTGTCTCAGGGTGAGGGAATAACGGTCATCACCGTCACCTCAAACCCAAAGAGCAAATGGCCTGTACTGTGTCAGATTCTGGCTTCTCTGTGCTGCAGTCCAGTGTGTTTTGAATTTCAGATTATGAAAGGAAAGCTGACAAACATCCACACAGCTCTTGCGCTCTGTGTGACGATCAGTTTCTGTGTTTTGACTGGGAAAGCTTTGTGCGAGAAGGATGAAGATGCAAAGGATCCAGAAGTTTACAAGCCGCTCCTGGAAGACGACACTGCTGGTGCTGCATGTTAGAGAGACAAGATTAACACACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_01119958_01123077.mRNA True 850 mRNA 0.37 3 1119430 1123099

Neighbor

gene id symbol gene type direction distance location
CI01000027_01089832_01104918 NA coding upstream 14450 1089832 ~ 1104980 (+)
CI01000027_01045587_01050470 MEX3A coding upstream 68567 1043392 ~ 1050863 (+)
CI01000027_01033975_01037549 NA coding upstream 81508 1032903 ~ 1037922 (+)
CI01000027_00980123_00987611 NA coding upstream 131546 979155 ~ 987884 (+)
CI01000027_00949578_00953698 NA coding upstream 165149 948721 ~ 954281 (+)
CI01000027_01134221_01143363 NA coding downstream 9058 1132157 ~ 1143526 (+)
CI01000027_01148208_01150893 NA coding downstream 24959 1148058 ~ 1150917 (+)
CI01000027_01153787_01158632 NA coding downstream 30688 1153787 ~ 1159001 (+)
CI01000027_01162273_01168513 NA coding downstream 39174 1162273 ~ 1168657 (+)
CI01000027_01176638_01185141 NA coding downstream 52737 1175836 ~ 1185307 (+)
G138289 NA non-coding upstream 94490 1021521 ~ 1024940 (+)
G138312 NA non-coding upstream 104185 1015044 ~ 1015245 (+)
G138311 NA non-coding upstream 106276 1012877 ~ 1013154 (+)
G138309 NA non-coding upstream 115084 1003993 ~ 1004346 (+)
G138300 NA non-coding upstream 134731 984457 ~ 984699 (+)
G138350 NA non-coding downstream 91349 1214448 ~ 1214747 (+)
G138355 NA non-coding downstream 95554 1218653 ~ 1218878 (+)
G138357 NA non-coding downstream 97773 1220872 ~ 1225465 (+)
G138298 NA non-coding downstream 112760 1235859 ~ 1236549 (+)
G138290 NA other upstream 120249 995970 ~ 999181 (+)
G138247 NA other upstream 249855 855388 ~ 893121 (+)
G138238 NA other upstream 287747 829774 ~ 831683 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 690754 390683 ~ 499760 (+)
G138057 NA other upstream 1022703 93559 ~ 96727 (+)
G138436 NA other downstream 383862 1506961 ~ 1507816 (+)
G138515 NA other downstream 541309 1664408 ~ 1676860 (+)
G138915 NA other downstream 2361288 3484387 ~ 3486647 (+)
G138953 NA other downstream 2378973 3502072 ~ 3520065 (+)
G140436 NA other downstream 3614299 4737398 ~ 4774262 (+)

Expression


Co-expression Network