CI01000027_01134221_01143363


Basic Information

Item Value
gene id CI01000027_01134221_01143363
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1132157 ~ 1143526 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_01134221_01143363.mRNA
AAATAAATAGGCGCCCATCTCCCTACACAGGTTGACAGAGCCAGACTCACACAGAATCTCAACAGTAATGTTATTGTACCTAGTGATGGCCGATTTCGAAACACTGCTTCAAGAAGCTCCGAAGCTTTATGAATCTTTTGTTTCGAATCAGTGATTCAGAGCATGTATCAAACTGCCAAAGTCACGCAATTTCAGTAAACGAGGCTTCGTTACGTCATAACTGTTTCGAAACAGTTTGACATTTCAATGTTTCACCGGTAGAGGGCGATTATCTCTGTGAACCCATGAATCATGCGGATTCACTGAGAACCATTGAACAAGTGTCTATGTGCTTTACCCTATGGTCAAAGAATATACACTAACAAGAAGCGACACTTAATAGAACGTTCCATTGCAACACCGGCGCCCAGCAGCAGCCCTGCGTTTCCGCCATTTTGGGGTGAAAGCGAGTCGGCAGTCCACTAGTTTCTACGGCAATATCAGCTGCTTTGTTAAAAAAAAAAAAACATACATTAAAGCTGAAATCCAACTTGAATGATGACAACACAGAATAAAATACTATCACTAGTGATCATCATATCCTTTTTACAGTTTATTTTACACACTTTGTGTTTAAGTCTTCCACTTTTTTCACAAAACCTTCGCTCTCTCAAAACCCAGTCAGTTTGGGTTGAAATTCTTTAAAAGGCTTATAAACACTGAATTATTACCAACATATGAAATTAAATGAAGGACATGCATCAGAAAAATTGGGAATGTTGGACAATAAATATATGAATATAACAGCTTGATTTTGCAGTGTTGTCTAATGTCCGTTAAAGCAAAAGTGTCCAAAAGTGGGAATTATGCTATAACGGACACAGCAATGCATTATGTATTATAAGATCATTATGTTTGTATCGTGATCCATTAAAAAGTACAATATAGCCTATTTCAATTCAGACCTAGATATTATTGCTATTACTCCACTAGGTCTAAAATATATTGTTTGCGGCAAACATGATGATCTTAAATTTATTAATTATTAATTTACTATTAATAAATGTGTAAAGTTGCATAAAATGGAAATACTCAATAAAGTGGGCTAACTATGTTACCTCAGATGGTTGAATGGTTGGATTCCACAACTGGTAAAATAAAACACATATAAGACAATACGACATTTACTGTGGGAGCCATACAATTTACTGGTGACTTAATTTAAAAAACTGTTCTATTGCGCTTCTGATTTGGCAGTGAAATTCGCCGATTTTGGGTGCGTAAGATGTGAAGGATTCTATGGTCCAGTTAGTATTTTCACCCCATAATGGCGACCGCGCTACCGGAGCGCCATCTAGTGGCTGTTACCCAAAAAATATCAAAGTGTCGCCTCTTGGGTTCTAAGCTCTTTACTATGGTTTTACCTGATCTCTGTCTGATTAGTGTTACACATTTGTAGACGTTTTAATTAGACATTAGTATAATTAAAATGAATATTGGTGGTTATTAATCTCTTATTGGCCTGTTTAGCTTGAACAATGGAACAAACAAAACAAGCCCTGAAAATTGCTAAAAGAACACATATTATACAGACACTCTATATTTAATTTTATTAGATGATTAGTTAATTGCATTTGATAGATTTTACTTTTAATAAAACATTTGCAATAGATTTGTAAAAGGTGTTTTTATGCATGTTTAGCGTGAGTTTTGTGGCATTTACACTGTTCTGACCACTAGGGGTCACCGTGGAGACGGGTGTCAGATTGTTTCGAAGCCTCGACACATTACGGCACATTTGCTTCAACCGTTTCAGTGTTTCACGAAGCCTCGCTCTGCCCATCACTAATTGTACCCACACTTTAGGTTTACATTTCACAAGTTGCTCAATAGCAAATAAAACAACAACGTCTCTGGGATAGAGGATAAGGGATCTCTCTCGATCTGTGTCTCTCTGCTGCTTTATCTCTGTGGCACGCTGTGTAGCAGGTAAGCCACGCTGCCGCTAATTGGAATCAGCTGCAGATGATTTGAAGCGCTGCTTGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACAACATGGGAACATCCAAAACATACACAATTACGTCATGGGACGTAACAAAAGCAACAGGATTGCACAAAAAATTTCATTGTGCACCAGTGATATGTCAGAATTTCTGCCTGCTTTCTCAACTGAATTTCATTCAAACACTGCACAAGAGTACTCATCCACAAGTGTTTAATGATGAGGACACTCTCAATCTCCCTGCAAATTATGCAGTTGGCTGGATGGAAACTCTGGATGATGAAAAGTTAATTTCTACCATGCAGATAATTGAGAATGTTTACAAATTATATAATCAATATTTCAGACTCGTGCCATCTCTAATCTGGACTGAGACTCGCATAGACGTGCCACTGCTATACAAGTTAAACAAACAGGAGGTTCAGCCATTGTTAGCTGTGGGAAGATTTGTCTGCAGCATGTCTCTGACAGTGTCTCAGGGTGAGGGAATAACGGTCATCACCGTCGCCCCAAACCCAAAGAGCAAATGGCCCGTACTGTGTCAGATTCTGAGATTTCTGTGCTGCAGTCCAGTGTGTTTCGTATCTCAGAATATGAAAGGAAAGCTGACGAACACCCACACAGCTCTTGGGATTATCCAGATGATCGTTGGTATCCTCAATATTGTGGTGGGGATTGTGTTTACATGCCTTGGGTTATACTGGAACATATATAGGATGGCCATGGGACCCTTTTGGCTCGGTAGTATGTTCCTTGTAGCTGGAATTGTGTGTATTCTTGCAGCTAAGTTTCCCAGTTCTTGTCTGCTGGTCATCGGAATAATTCTGAATGTAGTCAGTGCTGCACTGGCTCTCACAGCTGTTGCGCTGTATTCAGTGGACCTTGCGAATACTCATACTGGATATTACTACGATGATTCTTGTGATGAAAGCTACAATTCTTATTCAGGCTATTCACGCTATGATTATGATAGATATAGAACCCCTTCCCCTGAAGAGAACATGAGAAAGGAGACCTGTCTGTACTACAAGAATCTCACTGAGCTCTGTGTGACGATCAGTTTCTGTGTTTTGACTGGGAAAGCTTTGTGCAAGAAGGATGAAGATGCAAAGGCGGTGGAGGATCCAGAAATTCACAAGCTGCTCCTGGAAGACACCACTGCCGGAGCTGCATGACAAGATTAACAGACAAAATAACCAGTCATATTGTTATCAGTCTTCTTGTTTCCTTTTACAAAAGTGGTGTTACCATTGATCTCTCTATATATAGATTAGTGGGTGTTACCTTTTGTTACCTTTTTCAGTTTTGTTACGATCTTTGGGGCAGCTTTTTTAAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_01134221_01143363.mRNA True 3352 mRNA 0.39 9 1132157 1143526

Neighbor

gene id symbol gene type direction distance location
CI01000027_01119958_01123077 NA coding upstream 9058 1119430 ~ 1123099 (+)
CI01000027_01089832_01104918 NA coding upstream 27177 1089832 ~ 1104980 (+)
CI01000027_01045587_01050470 MEX3A coding upstream 81294 1043392 ~ 1050863 (+)
CI01000027_01033975_01037549 NA coding upstream 94235 1032903 ~ 1037922 (+)
CI01000027_00980123_00987611 NA coding upstream 144273 979155 ~ 987884 (+)
CI01000027_01148208_01150893 NA coding downstream 4532 1148058 ~ 1150917 (+)
CI01000027_01153787_01158632 NA coding downstream 10261 1153787 ~ 1159001 (+)
CI01000027_01162273_01168513 NA coding downstream 18747 1162273 ~ 1168657 (+)
CI01000027_01176638_01185141 NA coding downstream 32310 1175836 ~ 1185307 (+)
CI01000027_01413155_01416305 NA coding downstream 269575 1413101 ~ 1417658 (+)
G138289 NA non-coding upstream 107217 1021521 ~ 1024940 (+)
G138312 NA non-coding upstream 116912 1015044 ~ 1015245 (+)
G138311 NA non-coding upstream 119003 1012877 ~ 1013154 (+)
G138309 NA non-coding upstream 127811 1003993 ~ 1004346 (+)
G138300 NA non-coding upstream 147458 984457 ~ 984699 (+)
G138350 NA non-coding downstream 70922 1214448 ~ 1214747 (+)
G138355 NA non-coding downstream 75127 1218653 ~ 1218878 (+)
G138357 NA non-coding downstream 77346 1220872 ~ 1225465 (+)
G138298 NA non-coding downstream 92333 1235859 ~ 1236549 (+)
G138290 NA other upstream 132976 995970 ~ 999181 (+)
G138247 NA other upstream 262582 855388 ~ 893121 (+)
G138238 NA other upstream 300474 829774 ~ 831683 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 703481 390683 ~ 499760 (+)
G138057 NA other upstream 1035430 93559 ~ 96727 (+)
G138436 NA other downstream 363435 1506961 ~ 1507816 (+)
G138515 NA other downstream 520882 1664408 ~ 1676860 (+)
G138915 NA other downstream 2340861 3484387 ~ 3486647 (+)
G138953 NA other downstream 2358546 3502072 ~ 3520065 (+)
G140436 NA other downstream 3593872 4737398 ~ 4774262 (+)

Expression


Co-expression Network