CI01000027_01148208_01150893


Basic Information

Item Value
gene id CI01000027_01148208_01150893
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1148058 ~ 1150917 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_01148208_01150893.mRNA
CTATTTAAAGTGTTAAATGTCTATGCTTTGTGTCCTCCAAGTTATGTACAAAAATAATGAGCAGTAATCATTTTTTGTCCTTATCGTTTCATGCAGTTAAACAAACAGGAGGTTCAGCCATTGTTACCTGTGGGAAGATTTGTCTGCAGCATGTCTCTGACAGTGTCTCAGGGTGAGGGAATAACGGTCATCACCGTCACCTCACACCCAAAGAGCAAATGGCCCGTACTGTGTCAGATTCTGGCTTCTCTTTGCTACAGTCCAGTGTGTTTCGTATCTCAGAATATGAAAGGAAAGCTGACGAACACCCACACAGCTCTTGGGATTGTCCAGATGATAGTTGGTATCCTTAATATTGTGATGGGGATCGTGTTTACATGCCTTGGGTTACACCATAACATGAATAGGATGGCCATGGGACCCTTTTGGATTGGTAGTGTGTTCCTTGTAGCTGGACTTGTGTGTATTCTTGCAGCCAAGTTTCCCAGCTCTTGTCTGCTGGTCATCGGAATGATTCTGAATGTAGTCAGTGCTGCACTGGCTATCACAGCTGTTGCGCTGTATTCAGTGGACCTTGCGAATACTCATACTGGATATTACTATGATTATTCTTGTGATGAAAGCTACAATTCTTATTCAGGCTATTCACGCTATGATTATAGTACATATAGAACCCCTTCCCCTAAAGAGAACATGAGAAAGGAGACCTGTCTGTACTACAAGAATCTCACTGAGATGGTCTTCAGAGGACTAGATATCATGATGATAGTGTTGTCGGTCCTTCAGCTCTGTGTGACGATCAGTTTCTGTGTTTTGACTGGGAAAGCTTTGTGCAAGAAGGATGAAGATGCAAAGGATCCAGAAATTTTCAAGCCGCTCCTGGAAGACGACACTGCTGCTCCTGCAAGTTAGAGAGACAAGATTAACACACAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_01148208_01150893.mRNA True 936 mRNA 0.43 6 1148058 1150917

Neighbor

gene id symbol gene type direction distance location
CI01000027_01134221_01143363 NA coding upstream 4532 1132157 ~ 1143526 (+)
CI01000027_01119958_01123077 NA coding upstream 24959 1119430 ~ 1123099 (+)
CI01000027_01089832_01104918 NA coding upstream 43078 1089832 ~ 1104980 (+)
CI01000027_01045587_01050470 MEX3A coding upstream 97195 1043392 ~ 1050863 (+)
CI01000027_01033975_01037549 NA coding upstream 110136 1032903 ~ 1037922 (+)
CI01000027_01153787_01158632 NA coding downstream 2870 1153787 ~ 1159001 (+)
CI01000027_01162273_01168513 NA coding downstream 11356 1162273 ~ 1168657 (+)
CI01000027_01176638_01185141 NA coding downstream 24919 1175836 ~ 1185307 (+)
CI01000027_01413155_01416305 NA coding downstream 262184 1413101 ~ 1417658 (+)
CI01000027_01519267_01519711 AFP4, APOA2 coding downstream 368350 1519267 ~ 1519776 (+)
G138289 NA non-coding upstream 123118 1021521 ~ 1024940 (+)
G138312 NA non-coding upstream 132813 1015044 ~ 1015245 (+)
G138311 NA non-coding upstream 134904 1012877 ~ 1013154 (+)
G138309 NA non-coding upstream 143712 1003993 ~ 1004346 (+)
G138300 NA non-coding upstream 163359 984457 ~ 984699 (+)
G138350 NA non-coding downstream 63531 1214448 ~ 1214747 (+)
G138355 NA non-coding downstream 67736 1218653 ~ 1218878 (+)
G138357 NA non-coding downstream 69955 1220872 ~ 1225465 (+)
G138298 NA non-coding downstream 84942 1235859 ~ 1236549 (+)
G138290 NA other upstream 148877 995970 ~ 999181 (+)
G138247 NA other upstream 278483 855388 ~ 893121 (+)
G138238 NA other upstream 316375 829774 ~ 831683 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 719382 390683 ~ 499760 (+)
G138057 NA other upstream 1051331 93559 ~ 96727 (+)
G138436 NA other downstream 356044 1506961 ~ 1507816 (+)
G138515 NA other downstream 513491 1664408 ~ 1676860 (+)
G138915 NA other downstream 2333470 3484387 ~ 3486647 (+)
G138953 NA other downstream 2351155 3502072 ~ 3520065 (+)
G140436 NA other downstream 3586481 4737398 ~ 4774262 (+)

Expression


Co-expression Network