CI01000027_01153787_01158632


Basic Information

Item Value
gene id CI01000027_01153787_01158632
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1153787 ~ 1159001 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_01153787_01158632.mRNA
ATGTCTCTGACAGTGTCTCAGGATGAGGGAATGACGATCATCACCATCACCTCAAACCCAAAGAGCAAATGGCCCGTACTGTGTCAGATTCTGGGTTCTGTGTTCTGCAGTCCAGTGCATTCTGTATCTGAGGATGTGAAAGATAAGCTGACAGGCACCCAGAGAGCTTTTGGGATTGTACAGATAATAGTTGCAGTCATGAATTTTGTGTTGTGCTGTTTTGGCTTCGTCTTCTTTTATCTTTTTTCTGCGTGGGCCATCAGGATGGTGGGCTTCGAAGGACTACATAACACAGTGTTAGTGTTGTCAGTCCTTCAGTTCTGTGTGGCTGTCTTTTTCTGTGTTTTGACTGTAAAATCTTTAAACAAGAAGGGCGGAAGTGCAAAGTTGGTGGAGGACACAGCTTCAGAATCCAGAGGTGGAATATGCCAATATTCATCTCTGTTTGGTCACAGCTGTAACATGACTCTTACAGTGTCTCAGATTGTACAGATTATTGTCGGTGTGATGAATATGACAGTGGGTTGCTTTGGCTTTGTCTCTTCATTTTGGATTGGTGGTGTGTTCTTTGTTGTTGGAATCATGTGTGTTCTTGCAGTCAAGTTTCCCAGTCCTAGGCTGCTTGTAATTCTATTGATTCTCAACATAGTCAGTGCTGCACTGGCTATTACAGCTGTTGTGCTGTTTTCAATGGACCTGACAATGGGTAACAGTTTAAACTGTTATCCTTATTATTCATCTAGTAATGATTTTTTAATACGTGCCCTAGAAAAGAGTAACATTGAGACCTGTTTGCAGTACAGGAATCTCAATCAGCTCTGTGTGACGATCAGTTTCTGTGTTTTGACTGGGAAAGCTTTGTGCGAGAAGGATGAAGATGCAAAGGCGGTGGAGGATCCAGAAATTCACAAGCCGCTCCTGGAAGACGACACTCCTGGTGCTGCATGACAATATAAACATTTAAACACTTTGTTTTTGTAATGGAAAGTGAAATTATTTATTATTTTTACCATCTCCACTACAGACATGAAGTTACATATTTTAGTCACAAATATTTTTGGGTACTTTTAGAAAGAAAAGGTTTGCTTTTTGAAAAAAAAAAAAAAAAAATTCTTTGACTTTTTTTTTTTTTTTTAGCATGACTCTTTGTAGAACATTTGCAATTTGTCCAAGCAGAGTAGCCACTTGTGTATTTTATCAGTTGACCAGAAAGTATCCAAATATTTTTTTTAAACCATAGATTGTTTTATCATTTAAAAGTTGGAAAATTCTCTTTGTATAATAGTATGCATGTATAGCGTGCTTGTGCTCTTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_01153787_01158632.mRNA True 1317 mRNA 0.38 9 1153787 1159001

Neighbor

gene id symbol gene type direction distance location
CI01000027_01148208_01150893 NA coding upstream 2870 1148058 ~ 1150917 (+)
CI01000027_01134221_01143363 NA coding upstream 10261 1132157 ~ 1143526 (+)
CI01000027_01119958_01123077 NA coding upstream 30688 1119430 ~ 1123099 (+)
CI01000027_01089832_01104918 NA coding upstream 48807 1089832 ~ 1104980 (+)
CI01000027_01045587_01050470 MEX3A coding upstream 102924 1043392 ~ 1050863 (+)
CI01000027_01162273_01168513 NA coding downstream 3272 1162273 ~ 1168657 (+)
CI01000027_01176638_01185141 NA coding downstream 16835 1175836 ~ 1185307 (+)
CI01000027_01413155_01416305 NA coding downstream 254100 1413101 ~ 1417658 (+)
CI01000027_01519267_01519711 AFP4, APOA2 coding downstream 360266 1519267 ~ 1519776 (+)
CI01000027_01543335_01543974 NA coding downstream 384334 1543335 ~ 1544229 (+)
G138289 NA non-coding upstream 128847 1021521 ~ 1024940 (+)
G138312 NA non-coding upstream 138542 1015044 ~ 1015245 (+)
G138311 NA non-coding upstream 140633 1012877 ~ 1013154 (+)
G138309 NA non-coding upstream 149441 1003993 ~ 1004346 (+)
G138300 NA non-coding upstream 169088 984457 ~ 984699 (+)
G138350 NA non-coding downstream 55447 1214448 ~ 1214747 (+)
G138355 NA non-coding downstream 59652 1218653 ~ 1218878 (+)
G138357 NA non-coding downstream 61871 1220872 ~ 1225465 (+)
G138298 NA non-coding downstream 76858 1235859 ~ 1236549 (+)
G138290 NA other upstream 154606 995970 ~ 999181 (+)
G138247 NA other upstream 284212 855388 ~ 893121 (+)
G138238 NA other upstream 322104 829774 ~ 831683 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 725111 390683 ~ 499760 (+)
G138057 NA other upstream 1057060 93559 ~ 96727 (+)
G138436 NA other downstream 347960 1506961 ~ 1507816 (+)
G138515 NA other downstream 505407 1664408 ~ 1676860 (+)
G138915 NA other downstream 2325386 3484387 ~ 3486647 (+)
G138953 NA other downstream 2343071 3502072 ~ 3520065 (+)
G140436 NA other downstream 3578397 4737398 ~ 4774262 (+)

Expression


Co-expression Network