CI01000027_01162273_01168513


Basic Information

Item Value
gene id CI01000027_01162273_01168513
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1162273 ~ 1168657 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_01162273_01168513.mRNA
GGAAGGTTGAGGTTCATCAACTCCGTCTGCAGCATCATGTCTCTGACAGTGTCTCAGGATGAGGGAATGACGGTCATCACCATCACCTCAAACCCAAACAGCAAATGGCCCGTACTGTGTCAGATTCTGGGTTCTCTGTTCTGCAGCGACAGTCCAGTGTGTTCTGCATCTCAGGATATGAAAGAGACAGACACCAAGAGAGCTTTTGGGATGGAACTGATAAGAGTTGCAGTCATGAATATTGTCTTGGGCTGTTTTGGCTTCGTTTTCTTTTATATTACTTCTACATGGGCCAACAGTATGCTGCTCTTCGGAAGACTACATATAGTGATGGTGTTGCCGGTTCTTCAGCTGTGCGTGGCTGTCAGTTTCTGTGTTTTGACTGTAGATTCTTTGTGCAAGAAGGGCGGGAGTGCAGAGTTGGTGGAGGACAAGAGTTCAGAATCCAGAAGTGATTCATCTCCGTTTGGTCACAGCTGTAACATGACTCTTACAGTGTCTCAGATTCCACAGATTATAGTCGGTGTGATGAATATCACAGCGGGTTGTTTTGGTTTTGTACCTTCTTTTTGGATCGGTGGTGTGTTCCTTGTTGTTGGAATCATGTGTGTTCTTGCAGTCAAGTTTCCCAGTCCTAGGATGCTTGTATTACTAGTGATTCTGAACATAGTCAGTGCTGCACTGGCTGTCTTGGCTTTTGTGCTGTTTTCAGCAGAACTGGCGTTGGGAGACAGTTTAAGATGTGTTGACGAATATTATCATTATTCATCTTATAATGACTTTGCAAAGCATGCCCAAGAAGGGAAGACTAGCTCTGAGACCTGTTTGTACATGGATCTCAATCAGCTCTGTGTGACGATCAGTTTCTGTGTTTTGACTGGGAAAGCTTTGTGCGAGAAGGATGAAGATGCAAAGTTGGTGGAGGATCCAGAACTTCACAAGCCGCTCCTAAAAGACGACACTGCCGTTCCTGAATGACAAGATGAACACTAAAACACATTTTTATTTGAACACATTTTCGTTGTTTTATAAATGGAAAGTGAAATGATTTATGTTGTCATCTGCAACACCACAGAAGTGAAGTTACACTCTTCACAAATATTTTTGATACTTTTAGAAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_01162273_01168513.mRNA True 1122 mRNA 0.43 9 1162273 1168657

Neighbor

gene id symbol gene type direction distance location
CI01000027_01153787_01158632 NA coding upstream 3272 1153787 ~ 1159001 (+)
CI01000027_01148208_01150893 NA coding upstream 11356 1148058 ~ 1150917 (+)
CI01000027_01134221_01143363 NA coding upstream 18747 1132157 ~ 1143526 (+)
CI01000027_01119958_01123077 NA coding upstream 39174 1119430 ~ 1123099 (+)
CI01000027_01089832_01104918 NA coding upstream 57293 1089832 ~ 1104980 (+)
CI01000027_01176638_01185141 NA coding downstream 7179 1175836 ~ 1185307 (+)
CI01000027_01413155_01416305 NA coding downstream 244444 1413101 ~ 1417658 (+)
CI01000027_01519267_01519711 AFP4, APOA2 coding downstream 350610 1519267 ~ 1519776 (+)
CI01000027_01543335_01543974 NA coding downstream 374678 1543335 ~ 1544229 (+)
CI01000027_01546280_01571152 NTRK1 coding downstream 377086 1545743 ~ 1571220 (+)
G138289 NA non-coding upstream 137333 1021521 ~ 1024940 (+)
G138312 NA non-coding upstream 147028 1015044 ~ 1015245 (+)
G138311 NA non-coding upstream 149119 1012877 ~ 1013154 (+)
G138309 NA non-coding upstream 157927 1003993 ~ 1004346 (+)
G138300 NA non-coding upstream 177574 984457 ~ 984699 (+)
G138350 NA non-coding downstream 45791 1214448 ~ 1214747 (+)
G138355 NA non-coding downstream 49996 1218653 ~ 1218878 (+)
G138357 NA non-coding downstream 52215 1220872 ~ 1225465 (+)
G138298 NA non-coding downstream 67202 1235859 ~ 1236549 (+)
G138290 NA other upstream 163092 995970 ~ 999181 (+)
G138247 NA other upstream 292698 855388 ~ 893121 (+)
G138238 NA other upstream 330590 829774 ~ 831683 (+)
CI01000027_00391159_00499309 CSMD3 other upstream 733597 390683 ~ 499760 (+)
G138057 NA other upstream 1065546 93559 ~ 96727 (+)
G138436 NA other downstream 338304 1506961 ~ 1507816 (+)
G138515 NA other downstream 495751 1664408 ~ 1676860 (+)
G138915 NA other downstream 2315730 3484387 ~ 3486647 (+)
G138953 NA other downstream 2333415 3502072 ~ 3520065 (+)
G140436 NA other downstream 3568741 4737398 ~ 4774262 (+)

Expression


Co-expression Network