CI01000027_01420180_01439837 (MTMR11)


Basic Information

Item Value
gene id CI01000027_01420180_01439837
gene name MTMR11
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1420122 ~ 1439837 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_01420180_01439837.mRNA
GAGAGTGTGTGCTGCAGCGGGCCGTGCTGGTGAGGAAGAAGCTGTCGGCTAAGGAAGGAGGAGGCTGGTTGTCTGGGACTCTGTTCTGCACTCATTTCAGAGTAGCCTTTGTGCCTCAGGACAGCCAGAAACCTGACGATAATGCAGATCCCGTGCTGCTTGGAGATCATGACGTAGCCCTCGCCTCTATTGACAAAGTTGTGGCAGTGGGACCATCTCGCACCAAACTCGTGACCCCTACCTGCTCTCTGAAGTTCACCCCGGAGGAACTGGTGTTGTACTGCCGAGACTTGCGTGTTCTCTGCTTCCTGTTCGACAGACTCACACCTGATACTCAAGCTGTGGAGATTACGTATACGATTGCTAAGACCTACCAGCCACTGAAACCTGGGACCATCCTCTCCTTCCAGAATGCTGCTTTGGGTAGTATTGAAATGAAGCAGTTTCTAAGCAACAGGCGGCGTGACCCTACCATGAACTGGTTCGAGAGTTCGTTGGGTTGGGAGCAGGAGCTGGAGAGGACAGGTGCCACCGGCTGGAGGGTCAGCTCTGTCAATGACCGCTTTGAGATGTCCACCAGTCTGCCCAGATTCAATGTGGTTCCTCAGAGGGTCTTAGACACAGAGCTCAAGAAAACATTTGCTCACTTCAACGAGGGACGCATCCCAGAACCTGGAGTTGGTGCTCTTTGGCGGACAGCAGCTGTGTGTGATTGTGGATCTGGGAGAGGAAATGCCGTCACCTGCAGATATCCAACTGGCTCACACGAGACTCCGGACTCTTTGTCTAGGCGCTGTTTTGAGACTCGGAGAATTGGGTACGGATCTGAAGATTTTGTGTACAAAGACATTTCGTCATCTGTATCGGTACCTGATGACAAGTGGCTCTCCACACTTGAAAGCACTCGTTGGCTCGACTATACCAGGTGCTGTCTGAGAAAAGCCGCAGAGGTCGCTTGTTTGCTCAGAGGAGGTCACATGACTGTTGTTCTCCAAGAGCCAGAGGATCGAGACATGAACTGTGTGGTCTGCAGTCTGGTGCAGGTGATGTGTGACCCTCACTGCAGGACTGTGGCTGGATTCCAGGGCCTGGTTCAGAAAGAATGGATCACGGCCGGACACAAATTCCTCAGCCGGATTAACTACCACCGTGAAAGTGATAAAGAGGAGTCCCGGAACATGCCCTGTGTGAACAAAAGGCAGGACCAATGCCGTAAGAGGTGTATTGTAGTGATGACGCTGAAGCTGAGATCATTCGCCAGCTTAGTGGAAAGGCCCCTGTATTCCTGCTGTTTCTGGACTGTGTGTGGCAGCTGTGGGCGCAGTATCCCGCACGCTTCCAGCTTACTGAAGACTACCTGCTGGCGCTGCATGACAGCGTGCACCTTCCACTCTTCAGCAGCTTCCTGGCCAACAGTCAGAGGGAGAGATGCCGCCGTTCACAGATGCTCTTTTAATCACATTTCTATGCTGTATTACAATATTTCCTCGCAGCATCTTCCCCAGAGTTACACCCCAGTAAACGGCCTAAGGGAATTGCCCATGGGTGCCCCGGAGGAGCCGGTAGACCCACCTTTCCCCCCGGTGTGGGACTGGGCCCTGCAGTACAGCAGCCAGAGACGAGCCCGCTTCACCCAACCCGTGTCACAGCCCGCCTGTCCTCCACCCGTCCTTAACGGAAACCTCAACACCAACCTGGACCGCAGCTGGCACAACGACGGACTGCCAGGTTCTGTGTTCCTGCTGTCCCGTAGCACATTCTCCCATCCCTCCAATCTGCTTCCCTGGAGGAGCGGCAACTCTGGCTCTTACTGGAAGAGCCACCGCAGGGCTCCTTCCTCTGAGAGTCTGTCTGGTCTCGAACGTCTCATCAGAGCCTGTTCGCTGTCTGAACCCTCGGAGAACAGCACAACCCTCCACGATCCATACGAGCCCCTGCTGCCCCTGCTCTTAGGGCCCTGTGTCAGACTATGGAGGGGCTGTTATTTACGGGGCGCGCTACACGCTCAGGCTTTCTCACACCCCATGTCTTCCTGCAGTCAGCATCCTTTAGAGCAGCTTTCCTGGGAAGTGCAGCAGCTCCGAGAGAAACTGGCTCAGGCTTCTGACAGACGCCCCGAAAACCAGACTAAACGACAGGAGCCACGCCGACTGGAGTCCAACCTCAACCAGAATGCCAACAATGGGACCTTCCTCTTCTCCTCTTCCTCTAGAACGTCTCAACAACAGCCGTCACCCAGCCGAAGTCCGGCCCACCCCTCCGTCCCCCCCAGAGCACAGCGGGCAGCATCTGATCCACCCAGGCCTGCACAGAGGAATAACGGCAAGCACACGTTTCTATTCGGCCACCAACAAGAGCCGCAATCAGGGCAGCGTTACATTCCGTCCTCCAGTGCCAAACTTCCCAAACGCCCAGGAAACACACACTGATCTGTAGGGAGGAAGGAAAGGGCACCCTCTGGTGTTTGTGTTACTAAAGCAAAATAAT

Function

symbol description
mtmr11 Predicted to enable phosphatidylinositol-3-phosphatase activity. Predicted to be involved in phosphatidylinositol dephosphorylation. Predicted to be active in cytoplasm and membrane. Orthologous to human MTMR11 (myotubularin related protein 11).

GO: NA

KEGG:

id description
K18085 MTMR10_11_12; myotubularin-related protein 10/11/12

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_01420180_01439837.mRNA True 2487 mRNA 0.55 16 1420122 1439837

Neighbor

gene id symbol gene type direction distance location
CI01000027_01361532_01381534 SV2A coding downstream 37356 1361288 ~ 1382766 (-)
CI01000027_01354194_01354663 BOLA1 coding downstream 65459 1354042 ~ 1354663 (-)
CI01000027_01327656_01344105 NA coding downstream 75274 1327626 ~ 1344848 (-)
CI01000027_01303308_01319462 NR2F5, NR2F1, NR2F1.L, NR2F2 coding downstream 98944 1302034 ~ 1321178 (-)
CI01000027_01289962_01294748 NA coding downstream 125307 1289860 ~ 1294815 (-)
CI01000027_01466387_01475758 OTUD7B coding upstream 25710 1465547 ~ 1475758 (-)
CI01000027_01499088_01500312 RBM8A coding upstream 59203 1499040 ~ 1502028 (-)
CI01000027_01587854_01598407 NA coding upstream 147901 1587738 ~ 1598446 (-)
CI01000027_01610574_01630928 SMG5 coding upstream 170604 1610441 ~ 1630928 (-)
CI01000027_01651455_01676579 SYNGAP1B coding upstream 210974 1650811 ~ 1676579 (-)
G139514 NA non-coding downstream 86584 1333312 ~ 1333538 (-)
G139443 NA non-coding downstream 94861 1324926 ~ 1325261 (-)
G139436 NA non-coding downstream 121335 1296520 ~ 1298787 (-)
G139432 NA non-coding downstream 143632 1276290 ~ 1276490 (-)
G139424 NA non-coding downstream 176409 1241803 ~ 1243713 (-)
G139457 NA non-coding upstream 21343 1461180 ~ 1462825 (-)
G139498 NA non-coding upstream 23156 1462993 ~ 1463312 (-)
G139487 NA non-coding upstream 111248 1551085 ~ 1557170 (-)
G139553 NA non-coding upstream 168541 1608378 ~ 1609068 (-)
G139567 NA non-coding upstream 403539 1843376 ~ 1843598 (-)
CI01000027_01241417_01245177 NA other downstream 173145 1240478 ~ 1246267 (-)
G139117 NA other downstream 1182543 234212 ~ 237579 (-)
CI01000027_00131884_00132650 NA other downstream 1286320 131395 ~ 132650 (-)
CI01000027_00108990_00118237 NA other downstream 1301819 108119 ~ 118408 (-)
CI01000027_02119227_02124423 NA other upstream 682293 2119131 ~ 2125142 (-)
CI01000027_02226447_02227499 NA other upstream 786788 2225781 ~ 2227499 (-)
G140118 NA other upstream 2061697 3509352 ~ 3584679 (-)
CI01000027_03787377_03788902 NA other upstream 2347541 3787377 ~ 3790279 (-)
CI01000027_03922380_03931033 NA other upstream 2482559 3922242 ~ 3931033 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location