CI01000027_01850735_01853042


Basic Information

Item Value
gene id CI01000027_01850735_01853042
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1850735 ~ 1853513 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_01850735_01853042.mRNA
CGTTCACCAGTAGTTGATTTACCAGTGGACGATACTCTGTTCAGTGAATCAACTTCAGAGATGTTTCTCCTCAAGAGCACAAAAATGTCAGACATTCCAGAGGAGCCAGAGGAGATGTATGAAAGCAGCCACCCATCCATCGTACCCCTGAAAGAAGCTACTCGGAGCGCTGAGGAAAAGGCAAAAATCAACTACATTACGGTGCATTATTCTCGCATGCCCAGTCCGGACCAGGCGACGGTCACAAACATTCCTCTACATGGAGGGAAAAAGCTCAAAGATGGTCCTAATGTTGTTCTCACCAAGCAACCGAGAGAGGGGGTGGAAGAGTCTGCAATCTAAAGCAGTCAACTGATGAAACATCACAACAAATGCTAGAAGAAATTGTGAAACCACACAGGGATTTTTTTAAACTACATGTACTTATAGAGCATGTGTGGACCACTTGATGTAGCCTGAAAGTCAGTGATCAAAGCTGAATTTTCAGCATATTACTCCAGTCTTCAGTGTCACATGATCATTCTAATATGCCAATTTCTTATTATTATCAGTGTTGAAAACAGTTAAAAACTGAAATCTTTGTTAAATCAAAAGTTCAAAAGAACAGCATTTATTTGAAACAGAAATCTTTTGTAACATTATAAATGTCTAAATCTTACTGTCCCCATACTTTTGAATGGTAGGGCAAATATGCTTGAGTGCAACCTTCTTGTTCTATAGATTTGATTAAACTCATCGTAAAAATATCCCACTTAAATATTACATTTAATTGACATGGTGTAATGGTGGTTCCTGACAGCCAGGAAGCTCCAA

Function

NR:

description
novel protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_01850735_01853042.mRNA True 813 mRNA 0.39 3 1850735 1853513

Neighbor

gene id symbol gene type direction distance location
CI01000027_01843365_01850501 FCGR2A coding upstream 234 1843365 ~ 1850501 (+)
CI01000027_01811625_01827803 RGL2 coding upstream 22553 1804199 ~ 1828182 (+)
CI01000027_01767031_01767683 NA coding upstream 82872 1766607 ~ 1767863 (+)
CI01000027_01572250_01574108 NA coding upstream 276325 1571893 ~ 1574410 (+)
CI01000027_01546280_01571152 NTRK1 coding upstream 279515 1545743 ~ 1571220 (+)
CI01000027_01865502_01875022 HPN coding downstream 11989 1865502 ~ 1877374 (+)
CI01000027_01878501_01881301 NA coding downstream 24988 1878501 ~ 1882247 (+)
CI01000027_01926296_01931553 NA coding downstream 72445 1925958 ~ 1931686 (+)
CI01000027_01937897_01954661 NA coding downstream 84241 1937754 ~ 1954787 (+)
CI01000027_01976509_01978931 NA coding downstream 122935 1976448 ~ 1980721 (+)
G138558 NA non-coding upstream 10587 1834015 ~ 1840148 (+)
G138594 NA non-coding upstream 57355 1789756 ~ 1793380 (+)
G138573 NA non-coding upstream 93947 1753206 ~ 1756788 (+)
G138545 NA non-coding upstream 106897 1743056 ~ 1743838 (+)
G138554 NA non-coding downstream 32721 1886234 ~ 1889683 (+)
G138549 NA non-coding downstream 37260 1890773 ~ 1903525 (+)
G138610 NA non-coding downstream 55729 1909242 ~ 1909468 (+)
G138612 NA non-coding downstream 57770 1911283 ~ 1911551 (+)
G138515 NA other upstream 173875 1664408 ~ 1676860 (+)
G138436 NA other upstream 342919 1506961 ~ 1507816 (+)
G138290 NA other upstream 851554 995970 ~ 999181 (+)
G138247 NA other upstream 981160 855388 ~ 893121 (+)
G138238 NA other upstream 1019052 829774 ~ 831683 (+)
G138915 NA other downstream 1630874 3484387 ~ 3486647 (+)
G138953 NA other downstream 1648559 3502072 ~ 3520065 (+)
G140436 NA other downstream 2883885 4737398 ~ 4774262 (+)
G140440 NA other downstream 2926904 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 3195410 5050310 ~ 5055755 (+)

Expression


Co-expression Network