CI01000027_01878501_01881301


Basic Information

Item Value
gene id CI01000027_01878501_01881301
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 1878501 ~ 1882247 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_01878501_01881301.mRNA
ATGACTGATGAAATGGGAAGGATGAAGATCCAAACCACTGTCCATCTGATGATGCTTCTGATCTTAGTGCTGCAGTTTGCTTCACTTACAAACGGCCTGTCACCCATTGTACTTCCTCAAAATGTGACCTCGGAGACCGGGAAAACTGTCACCTTTGAATGTGGTTACAGTGGCCTGAACTCGGAAAACATCAGATTTTACATCATGGGTTCGAAGGTCAATGATTCTGTGTCTTGTCCAGGAGACAAAACCAAATACTTACCCGCTCAGTCAATGAAAGCTTACTGTTATAAAAAATCCAGTGGAGATGTAGCTGCATGGGAAGTCGCAGGAACATCAGAAGACGACAACGGTACTGTTTTTTTGTGCAGGGTCAAAGGTGCTGATGATCACATCGGAAACCTTTATGTATACGAGAATGATTCTTACTATGCGAAGCTCATCGGATACGTGATTGGAGGATTTTTAGCCTGCCTCATCACCATCATTGCGGCTTATGTCCTGTTGAAAAGATCTGAGAAAGCGCAGCGATGCTTCAGGTCGGTGGGTGGAATCCAAGATGACGTGCAATCGCCACAAACTAAGCAATATTGAAACCCCTTTCATGCTTTCTATAAACAAATGTGGATTTTAAGGGTTTTTAATAATATATCATTATATAATATATGTAATATAGGCTACAACATACAATACAATTATCTTCTATACTACTGAAAGAAGGGCCTTTCTGCAGGTTTCATTCTTGTCCTGTAGGGGGCGTCTTCGTTACTCTATTCACAACATTAATTTCCTTATAGGACATGTTCCTGGTTCAACATCCTTTTTTTTTTTTTGGTTATGGAGGAACATTCTTATTAAACTGTCATAACTGTGTTCCTATTTCTAACCCTTACTTTCCCCTTTAATCAAAGGGATATTGATCCAGGTATATGTTCTTTTTGGCTAATCAACTTTAAGCATCAAGTAACTCCACCTTTCCATAATGTTTATCTTACACATACAAAGATCAGATTATTTAATCATGGATCTGCTGTTTAATGAACAGTCAAGTACTTTATATCACTGTTTACCTACTGTTTATGATATTAGCTTAGTTGGTTATTTTTTTGTTTTAAACAATGTAAATGACAACTTTGACTAATATAAGTTAATCACATTCATTTTATACTGCTTTCAGAGGCTAAATGACAACATTTTCAGGACACAAACTGAGCCTTTTGGATTGTACTGAGTAGATCAATAGTAGATGGGTCAATATTGACACAGGTGGTTCGCTGCACCCTGGAACGACTGTGCTTCTATTCTGCTACATTTTCCATTGTAGATATCAGTCCATGAGCATTTTAGTTTAGTTTCTAAAGTTTCTATCAGAAACAACGCATTTGAACCTGTTTTGAAGCTTTGGCTATTTGCATATGTGCTCCAGCACTTGTAAACACACAAGAGGTCACATTACAGCTCACAACAACTCTCTATCTTTATCTTACAGTCAGATTTATATTTAATGTTGTATGATATTTTCAGAATGTGCTCATAACAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_01878501_01881301.mRNA True 1540 mRNA 0.37 5 1878501 1882247

Neighbor

gene id symbol gene type direction distance location
CI01000027_01865502_01875022 HPN coding upstream 1562 1865502 ~ 1877374 (+)
CI01000027_01850735_01853042 NA coding upstream 24988 1850735 ~ 1853513 (+)
CI01000027_01843365_01850501 FCGR2A coding upstream 28000 1843365 ~ 1850501 (+)
CI01000027_01811625_01827803 RGL2 coding upstream 50319 1804199 ~ 1828182 (+)
CI01000027_01767031_01767683 NA coding upstream 110638 1766607 ~ 1767863 (+)
CI01000027_01926296_01931553 NA coding downstream 43711 1925958 ~ 1931686 (+)
CI01000027_01937897_01954661 NA coding downstream 55507 1937754 ~ 1954787 (+)
CI01000027_01976509_01978931 NA coding downstream 94201 1976448 ~ 1980721 (+)
CI01000027_01982332_01985064 NA coding downstream 99787 1982034 ~ 1985157 (+)
CI01000027_01998746_02018404 NA coding downstream 116425 1998672 ~ 2018789 (+)
G138558 NA non-coding upstream 38353 1834015 ~ 1840148 (+)
G138594 NA non-coding upstream 85121 1789756 ~ 1793380 (+)
G138573 NA non-coding upstream 121713 1753206 ~ 1756788 (+)
G138554 NA non-coding downstream 3987 1886234 ~ 1889683 (+)
G138549 NA non-coding downstream 8526 1890773 ~ 1903525 (+)
G138610 NA non-coding downstream 26995 1909242 ~ 1909468 (+)
G138612 NA non-coding downstream 29036 1911283 ~ 1911551 (+)
G138515 NA other upstream 201641 1664408 ~ 1676860 (+)
G138436 NA other upstream 370685 1506961 ~ 1507816 (+)
G138290 NA other upstream 879320 995970 ~ 999181 (+)
G138247 NA other upstream 1008926 855388 ~ 893121 (+)
G138238 NA other upstream 1046818 829774 ~ 831683 (+)
G138915 NA other downstream 1602140 3484387 ~ 3486647 (+)
G138953 NA other downstream 1619825 3502072 ~ 3520065 (+)
G140436 NA other downstream 2855151 4737398 ~ 4774262 (+)
G140440 NA other downstream 2898170 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 3166676 5050310 ~ 5055755 (+)

Expression


Co-expression Network