CI01000027_02034579_02038173


Basic Information

Item Value
gene id CI01000027_02034579_02038173
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 2034360 ~ 2039054 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_02034579_02038173.mRNA
GCATATATGTGTTTAATATGTTTTCAAGATTGAGGATCTTTGAAGAAACCCGCATACAATTTAACTGAATGAAAGAAGGAATGTTATTACATTTTAGCAAAAGGGTTAGGCTATAACCTTTAGCCAAGATGTGTAACCCAAGTTTTTACCATTTGTGCAGGAAGCGATTCTTCTGACAGCTGACGCCTACAGTACCTGAGAATTTTGTCAGACAAGCACATGATCAAAAACACCACAAAGGCTGTTGGCACTCCCAAACCTACTTCAACAACAAAAGTGAAACACAACACAACCAAAAAAGGAACCTGCATCAGCAGATCAGTCTTCAGCTGCTACACACAGGAGACAGACGTACAGATCTTTCTTATTACTTCAGGAGTGCAGGATAAAAAAGAAGCAAGAAGCATGGATTGCAAAAAGTCTCCAACAGAAGGAGGGCAGGCTTTACTTCCACTGCAGGAGGATCCTCCAGAGTACTCCAGTCATGGATTCCCTCCCTCTGAGATCTATCCCAGCACTTCAGGTCAATCTGCCCAGCAGTATGGAGCTCCGGCAGCACCTGGTCAGTGCATCCAAGGGCCATATCCAGGGCAGACTGTGGTCAATGTGCAGCCTGCAGTTAATGTGTCCTTCACTCCACTGGCCAATCCACAGCCAGATTACCTGTGCTATTCCATCTTTACCATGCTGTGCTGCTGCTTACCTCTGGGATCGGCTGCTCTTGTTTACTCCATCACAACTCGAGATGCTAACATGTTTGGACACCAACCAATAGCAAGCAGGAACTCCAGAATGGCTCGCATCCTTAACCATGTCAGTGTTGGTGTTGGCCTCCTCGTCTGGTTGATCACTGTTATCCGTATCATTAATTTTGTCATTGCAGTTAACTCTTACTGATATAGACCATAAGTGTAAGAAATATCATGGTAGGACACCAGAAAGTTATAGATAATGAGGGTTTTACAAACATTAACACATAATGATTCGAATACACAGTCTGCTTTTAAATGTTTTAATGTTGCTCAAGTGTTGTTTTAGTGTTGATATGAGAGCTGTAAGACTCCAAATGCGTAAGGAGCTCCATCTATAGGGCCGGAGAGGACTGATTCAGTATGTTTCATGTAACTGACATGTTATTATTATTATTATACTTTTTAAAAGTTCATTATTGTATTTTTAAAACAATGAAAGCTTTGACTGTAAATGTATCATCAATTAAAATATTTGTTTTTCTCCTTGTCTTAATGTTGCATCATAAAACTTTGAGTAATCAATAACAGAAATCTATCTATCTATCTATCTATCTATCTATCCATCCTCCATCCATCTGTATTTAAAAGGATAGGGTCTAGTTCACCCTAAAATAAAGTCATTATTTTGTGGTCTGAAAAAGAATGACGGGCATACGGCATTAGAAAAAAAAAAACAGGGTGAGTAAATGATGATTTTATTTTCATTTTAGGGTCAACTCCCCAAATCGATATTTGCTCCATCCATTAGGCCAGGGGTGTCCAAACATTTTTTAAAGGAGGCCAGATTAAATATTGTGGACATGCCTGGGCCGGATATATATATATATATATATACTGTATATATATATATAATTTATTTTCATTAACACAAATAATAACATCTGTACCATTTTAAAAGCTTATTCTTAAAGGATAAAATTTAAATATTCTTACTGAGTTAGAACTCTTATTAAAATGATAACCACAGTCATATCAGAGAGACCCCCTGATATGACTGTAAAGAACTTTGGGTGTACAACATAGTAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_02034579_02038173.mRNA True 1778 mRNA 0.38 3 2034360 2039054

Neighbor

gene id symbol gene type direction distance location
CI01000027_01998746_02018404 NA coding upstream 15571 1998672 ~ 2018789 (+)
CI01000027_01982332_01985064 NA coding upstream 49203 1982034 ~ 1985157 (+)
CI01000027_01976509_01978931 NA coding upstream 53639 1976448 ~ 1980721 (+)
CI01000027_01937897_01954661 NA coding upstream 79573 1937754 ~ 1954787 (+)
CI01000027_01926296_01931553 NA coding upstream 102674 1925958 ~ 1931686 (+)
CI01000027_02040721_02047487 NA coding downstream 1567 2040621 ~ 2047566 (+)
CI01000027_02059709_02072254 GAPDHS, G3PT, GAPDH coding downstream 20323 2059377 ~ 2072405 (+)
CI01000027_02083444_02085743 NA coding downstream 44089 2083143 ~ 2085780 (+)
CI01000027_02106256_02118045 NA coding downstream 67131 2106185 ~ 2118498 (+)
CI01000027_02125080_02146147 NA coding downstream 85780 2124834 ~ 2146502 (+)
G138627 NA non-coding upstream 68754 1965332 ~ 1965606 (+)
G138625 NA non-coding upstream 72504 1961552 ~ 1961856 (+)
G138612 NA non-coding upstream 122809 1911283 ~ 1911551 (+)
G138610 NA non-coding upstream 124892 1909242 ~ 1909468 (+)
G138686 NA non-coding downstream 13526 2052580 ~ 2052935 (+)
G138672 NA non-coding downstream 38026 2077080 ~ 2082052 (+)
G138693 NA non-coding downstream 80144 2119198 ~ 2119793 (+)
G138649 NA non-coding downstream 110275 2149329 ~ 2153741 (+)
G138656 NA non-coding downstream 115515 2154569 ~ 2155082 (+)
G138515 NA other upstream 357500 1664408 ~ 1676860 (+)
G138436 NA other upstream 526544 1506961 ~ 1507816 (+)
G138290 NA other upstream 1035179 995970 ~ 999181 (+)
G138247 NA other upstream 1164785 855388 ~ 893121 (+)
G138238 NA other upstream 1202677 829774 ~ 831683 (+)
G138915 NA other downstream 1445333 3484387 ~ 3486647 (+)
G138953 NA other downstream 1463018 3502072 ~ 3520065 (+)
G140436 NA other downstream 2698344 4737398 ~ 4774262 (+)
G140440 NA other downstream 2741363 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 3009869 5050310 ~ 5055755 (+)

Expression


Co-expression Network