CI01000027_02040721_02047487


Basic Information

Item Value
gene id CI01000027_02040721_02047487
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 2040621 ~ 2047566 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_02040721_02047487.mRNA
GTATATGAGAGTCTGAACCAGAATACAGCAATACATACGTCTCTGCAGAGCACAAGGCAAAGGAAATTACAATCAATATCAAAAGCCAATAATCAGAAAAATGGATCCCAGCAATCAGCCCCCAGGTGCCTGGAATTCATTTGAGAAATCAGGGATGCTGCAGCCACAACCACCAGCAGCAGCATGCCAGGAGATCCCTGCTGGATACTCTCCCTCCTTTCCAAGCCAGCCAGTCTCCCAGGGCCCCTATGCCCAAGGGCCATATCCAGGGCAATCCGTGGTCACTGTGCAGCCTGCAGTTTTTGTGACCACCGCTCCACTGGGCAATCCAGAGCCAGATTACATGTACTATTCCATCTTTACCATGCTGTTCTGCTGCTTACCTCTGGGCATCGCTGCACTGTTTTTCTCCTGGTCTGTAAGTATTAGTCCATTACAACACAACCCAATCCAACTACCAATCACCAACCTGATACACGGAACTGATCAGTTTTCACCTGACTACACACCAGAGAAAGACATACAGATCTTTCTTATCCCTTCAGGAGTGCAGGGGAAAAAAACGGAAGAAACATGGATCACAAAAATTCTCCAACAGAAGCAGGGCAGCCTTTACTTCCACTGCAGGAGGATCCTCCAGAGTACTCCAGTCATAGATTCCCTCCTTCTGAGATCTATCCCAGCACTTCAGGTCAACCTGCCCAGCAGTATGGAGCTCCGGCAGCACCTGGTCAGTGCATCCAAATGCCATATCCAGGGCAGACTGTGGTCACTGTGCAGCCTCCAGTTAATGTGTCCTTCACTCCACTGGCCAATCCACTGCCAGATCACCTGTGCTATTCCATCTTTACCATGCTGTGCTGCTGCTTACCTCTGGGATCGGCTGCTCTTGTTTACTCCATGACAGTAAGTTTTGATTCATACACCTGTCTCACCTCGCTTAGCATATTTACAAATGATAGGCCTACTCTTCAAACTAAATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_02040721_02047487.mRNA True 983 mRNA 0.48 2 2040621 2047566

Neighbor

gene id symbol gene type direction distance location
CI01000027_02034579_02038173 NA coding upstream 1567 2034360 ~ 2039054 (+)
CI01000027_01998746_02018404 NA coding upstream 21832 1998672 ~ 2018789 (+)
CI01000027_01982332_01985064 NA coding upstream 55464 1982034 ~ 1985157 (+)
CI01000027_01976509_01978931 NA coding upstream 59900 1976448 ~ 1980721 (+)
CI01000027_01937897_01954661 NA coding upstream 85834 1937754 ~ 1954787 (+)
CI01000027_02059709_02072254 GAPDHS, G3PT, GAPDH coding downstream 11811 2059377 ~ 2072405 (+)
CI01000027_02083444_02085743 NA coding downstream 35577 2083143 ~ 2085780 (+)
CI01000027_02106256_02118045 NA coding downstream 58619 2106185 ~ 2118498 (+)
CI01000027_02125080_02146147 NA coding downstream 77268 2124834 ~ 2146502 (+)
CI01000027_02156853_02161914 RBM42 coding downstream 109287 2156853 ~ 2162004 (+)
G138627 NA non-coding upstream 75015 1965332 ~ 1965606 (+)
G138625 NA non-coding upstream 78765 1961552 ~ 1961856 (+)
G138612 NA non-coding upstream 129070 1911283 ~ 1911551 (+)
G138610 NA non-coding upstream 131153 1909242 ~ 1909468 (+)
G138686 NA non-coding downstream 5014 2052580 ~ 2052935 (+)
G138672 NA non-coding downstream 29514 2077080 ~ 2082052 (+)
G138693 NA non-coding downstream 71632 2119198 ~ 2119793 (+)
G138649 NA non-coding downstream 101763 2149329 ~ 2153741 (+)
G138656 NA non-coding downstream 107003 2154569 ~ 2155082 (+)
G138515 NA other upstream 363761 1664408 ~ 1676860 (+)
G138436 NA other upstream 532805 1506961 ~ 1507816 (+)
G138290 NA other upstream 1041440 995970 ~ 999181 (+)
G138247 NA other upstream 1171046 855388 ~ 893121 (+)
G138238 NA other upstream 1208938 829774 ~ 831683 (+)
G138915 NA other downstream 1436821 3484387 ~ 3486647 (+)
G138953 NA other downstream 1454506 3502072 ~ 3520065 (+)
G140436 NA other downstream 2689832 4737398 ~ 4774262 (+)
G140440 NA other downstream 2732851 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 3001357 5050310 ~ 5055755 (+)

Expression


Co-expression Network