CI01000027_02125080_02146147


Basic Information

Item Value
gene id CI01000027_02125080_02146147
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 2124834 ~ 2146502 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_02125080_02146147.mRNA
GTTTAAAGAAATATTTTCCAATGTCACTTTTGGAGACATTGTGTAATTGCAAGGAGCATTTTTTGTCTTGGTTTGCAAACACTGTTCTGTTTTTGTACAGTTGGTCAATCTCTGCCGCCTCTGAGTGATGGACAAATATTCCCTGCTGTGATCCGCCTTGTTTCTGATGTTTATTTGGTTTGAACCATTTTGTAGTTTTAAGTGTGTGAAAAGATGGATAATCAAATGAGCAGGTGAAATCCACAGATGATCTTTCGAAAACACATATGGAACGAGGTTTGTATGAAACTGACCATGAAGCCAGAGCAGCTGAAACACACAAAAATGTTTGTTAAGGCTCCACCAACGGTTTTTGTGGCGTTTAGGCTCAAAGGCCGAGGTAGTCTCAGAATCCTCCCAGATAGATCCCTGCAGATTGTGGGAATTCAGCAGGAAGACCGTGGAACCTACACCTGTGAAGGCAAGATCAAGGGACGCCCCGTAACCAGGCATCTCCCGATCTCTGTTGTTGTTAATGAGCCACCGACCGTACTGATTCATGAGGAGAGAAAGAGTGTTCATGCCGGACCCAATACCAGTGTGTCTATAGTCTGCCTGGTCAAAGGAGCACCCACTCCAAATATAACATGGATGCTCCCTTCCACCTCTGACGACTCCCGTATCAGATTCAACTCCGATAAGAGTGAGCTCACCATCTCTTCAGTGACCAGGAGCAATTATGGAGAGTATGTCTGCACGGCTACCAATAAGATCGGAGAAAACTCTGCCACGTTTATTCTGGATGTCTCAGAGCATCCAACTATAGACTTGGATCCACGCAAGCTGACCGTTATTCCAGGAGAATCTGGATCGGTGCTCTGCAATGCCACAGGACATCCAACTCCAACCATACAATGGGTCAGGAAGGCTACCCAAGAAAAAATGACGAGTGTGGAGGGATCTGAGCTCATTCTTGAAAATGTAATGCCCTCTGATGGTGGCTTGTACTCCTGCATAGCCAGCAACCCGGTGGGCACAACCATTGAGGACTTCCAGCTGATAACCTGGCCTGGGGCACCCGCTCAGTTCAGTGTGGCCGCAGGGTCCTCATCTTCTGTCCTCATCCAGACTGTCTCAGTGCAGGACGGAGGGTCCTCTATTACCCAGTACATCCTTCAGTGGAAGAAACCGTCCGATGAAACCTGGAGTCAAAGTGTCGTCAAGCCCACAAATCCCCTGGTGATCACGGGCCTTGAGCCGTACACAGAGTACTCAGTTCGTTTTGCTGCCAAAAACTCACATTACCAGGGGAACTTCTCCACTGAACGTAGGATCTTCACACAGTCCGAACGGGAACCCGACAGCCCCGTTCTTTCTCTGAGCGAGAAAAAGTTGGAGAAGAACTCAATCTCCATCCCCATTAAACAGCTGAAAGACGGAGGCTCTCCCATCCAACACTACATTGTGCGCTACAAAGGGAACCAGGAGAATGACGAATGGGCTGAAAATAAATTTCCTGGAAACTCCAGCAGAATCCAGCTGAATGGTCTCCAGTACAATGCTGAATATCAAATGGAAGTTTATGCAGTAAACCGCAACGGCTCCTCCAGCCCTGCCAAAATCAACTTCACCGTCCCACAACCTGTCAGTCAGCCGATGCTTGGGAAAGGAGGTGTGGTGGGCATTGTAATATTCATCTTCTTGGTGCTGATGGTAGCAGTGGATGCTTTCTGCTGCTACACCAACCACTGCGGCCTGCTTAATTTCCTTGCTCGTAAACTATTTGGACACAAACTGCCAGATTCTACAGGGATGGATGAAGAGGCGAATAATTCAAATGGGAAGAAACCAGAATCTACTGATCCAGTAGGAGAGGCGTAGAGGAAGAGTTGTCACGTTCACCAGCTGGAGTGCCCATGAGTTCCTCCAGAGGGCACTCCTTCTGACTTTGTTGTTCTCCCATTATGAAATATATTCCCCACAATCCTTTGCCTGGACTCATTATGGCTTAATTTAATTTCTCCCACCTGTTAATCATTTACTGGTTTCAGTTTGCCTATTTAGGCTCTTGTGTTTTAGTTGTGGGTCATGAGTTATTTCTCCATTGGGCTATCTGGATGTCTTCTTTGTTCATTCCTTCCTTCCTTCATGGTCTTTGGATTATGTTCCTGTTTCTTTGTGTGGACTATTTGCCAGTTTCCAGGTTTGGAGTGTCTGTACTTTTTGCCTTTTGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_02125080_02146147.mRNA True 2215 mRNA 0.47 13 2124834 2146502

Neighbor

gene id symbol gene type direction distance location
CI01000027_02106256_02118045 NA coding upstream 6336 2106185 ~ 2118498 (+)
CI01000027_02083444_02085743 NA coding upstream 39054 2083143 ~ 2085780 (+)
CI01000027_02059709_02072254 GAPDHS, G3PT, GAPDH coding upstream 52429 2059377 ~ 2072405 (+)
CI01000027_02040721_02047487 NA coding upstream 77268 2040621 ~ 2047566 (+)
CI01000027_02034579_02038173 NA coding upstream 85780 2034360 ~ 2039054 (+)
CI01000027_02156853_02161914 RBM42 coding downstream 10351 2156853 ~ 2162004 (+)
CI01000027_02194222_02218628 ARHGAP30, ARHGAP33 coding downstream 47720 2194222 ~ 2219765 (+)
CI01000027_02230213_02233471 NA coding downstream 83711 2230213 ~ 2233491 (+)
CI01000027_02234729_02237937 NA coding downstream 88227 2234729 ~ 2238114 (+)
CI01000027_02242334_02250969 DCAF13 coding downstream 95832 2242334 ~ 2251188 (+)
G138693 NA non-coding upstream 5041 2119198 ~ 2119793 (+)
G138672 NA non-coding upstream 42782 2077080 ~ 2082052 (+)
G138686 NA non-coding upstream 71899 2052580 ~ 2052935 (+)
G138627 NA non-coding upstream 159228 1965332 ~ 1965606 (+)
G138625 NA non-coding upstream 162978 1961552 ~ 1961856 (+)
G138649 NA non-coding downstream 2827 2149329 ~ 2153741 (+)
G138656 NA non-coding downstream 8067 2154569 ~ 2155082 (+)
CI01000027_02254195_02308930 NA non-coding downstream 107046 2253903 ~ 2310086 (+)
G138669 NA non-coding downstream 124867 2271369 ~ 2324059 (+)
G138675 NA non-coding downstream 180390 2326892 ~ 2329110 (+)
G138515 NA other upstream 447974 1664408 ~ 1676860 (+)
G138436 NA other upstream 617018 1506961 ~ 1507816 (+)
G138290 NA other upstream 1125653 995970 ~ 999181 (+)
G138247 NA other upstream 1255259 855388 ~ 893121 (+)
G138238 NA other upstream 1293151 829774 ~ 831683 (+)
G138915 NA other downstream 1337885 3484387 ~ 3486647 (+)
G138953 NA other downstream 1355570 3502072 ~ 3520065 (+)
G140436 NA other downstream 2590896 4737398 ~ 4774262 (+)
G140440 NA other downstream 2633915 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 2902421 5050310 ~ 5055755 (+)

Expression


Co-expression Network