CI01000027_02147653_02152768


Basic Information

Item Value
gene id CI01000027_02147653_02152768
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 2147557 ~ 2153486 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_02147653_02152768.mRNA
ATATTTCTGCAGCTGTCTCTATCAGGTGAGTTTCTGATTTATTTGAGTATTTTTTTTTATTTGTTGATAATATTATTCAGTAAATAGTGAACTTATTGACTTAAAGACAACATTCGCTAAGATATTTCTGCTGTAATGACAAAGCTGCCTTTTTGAAAGTTTTTTATTTACATAAACTAGGAGGGAGAATATATTGAAATAATTAAATAAAATAATGATAAATAAATTAAATTAATTAAAATTAAAATAATTGAAGTTCATAACATGACATGAAGTTTCCAGTCATTCATGATTAAGTGTTTCTGCCCAATAAAATATTTTAGAGCTTGACATAACTAAACAAAAAATAAAAATCATTCTCTAAATTTCCATGACTTTTAATTTTTTATTATTATTATTCCTTTAAAACACCCTCATATAGCATACAGGTTTCCCATCCCAAAGCATGGATTACTGGGTCTTAAAAAATTACATTTGTTAAAAGAACAAATTAAAACAGCTTATTAGTTATTATAAAGCTTTTAAAGATTATAAAGATTTGTCTTATTTTAAATAATTTTAAGCCATTTTTGTGACTCCCTTGGAAGTGTGCTGACTGCTGAGGTCCCTTGGTTTAGAACCACTGGACTTTACAATTTGCTGCTGTACTTTTTGGTCAGATCTGATCATTGATAGTCTGTTAGAATCATCTGGAGCAATGATTAGAATCAGAGCAATGATGACTTACTGGAGCCTTAACAAACATTTTTGTGTGTTTCAGCTGCTCTGGCTTCATGAGGCGGCAGAGATTGACCAACTGTACAAAAACAGAACAGTGTTTGCAAACCAAGACAAAAACTGCTCCTTGCAATTATACAATGTCTCTAAAAGTGACATTGGAAAATATTTCTTTCGCCTTGAAACAAATTATTATCGTGGAAAATATACTGGACCGGGTGGCATATACCTCAACGTAGCAGTTCTACCTTTTAGAGTAACTGTGACAACGCAAAAGGTGTATGGACACATCCATGAAGGAGACTCTGTGACATTGAGATGCAGCACAGAAAACTGTACCCCGGAACAAGGGCCGTTTGCCTGGTTTAAAAACCACCTTCTGCTTCCACAAGCCACTGAGAATGAGCTCCAAATCTCTTCTGTCTCTCACAATGATTTTGGCAACTACTCCTGTGGTCTGAAGAACAGCAGCATGACTTCAGCAGATGAACTATTGCTTGATGTGAGATATAGTCCAAAGAATGTCGAAATAACCATTTTGACATCTGGAAAGATAGAACAAGGAAACTCACTGACTCTGATCTGTAAGAGCAATGCCAATCCTGCAGTGACAAACTACACTTGGTTTAAGATCAGAGATGGGAACATCTCTTCTATAGGATTTGATTGTGAATTCTCCATCAAAGCTGCCAGTCAGAAGGATGATGGACAGTACTTCTGCACGGCCAAAAATGACATGGGCTCTCAAAACTCTACGATCATAGCACTGAAAGTCGAAGTGCCTGATCGACATTTCTTGCTGACTGCAACAGCTTTGCTTTTCTTTGTAATAGTTGTACTGTTAGTCCTGTTTGGTCTCAATATAAGGAGGAAACAGATTACACCAAAGAAGCAGCCCACAGAACAGACACCTGCAGTCACTGTCACAGAGGAGATCTATGAGAACCTGAGAAAATCACCAGAGTCTGAAGAAAGCCATACCAACCTGATATATGCAGATCTAAACCTTCCTTCATTAACCTCAGACAGATCACATTCCAACAGTCAAGAGGACGACGCCGTGGTCTACAGTCTTCTCAGTAACAAAGAGTGAATGAATCTCTGCACTGTGAATAATGAGCTTTAGCCAGCACGTGTTGTAGATATTTCTCTTTTTATTCAAAAGAATCAAATGCCTATAGTGAATAAA

Function

NR:

description
Zgc:113199

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_02147653_02152768.mRNA True 1906 mRNA 0.36 8 2147557 2153486

Neighbor

gene id symbol gene type direction distance location
CI01000027_02119227_02124423 NA coding downstream 22801 2119131 ~ 2125142 (-)
CI01000027_01966516_01972432 NA coding downstream 174346 1966244 ~ 1973211 (-)
CI01000027_01855521_01856799 NA coding downstream 290701 1855352 ~ 1856856 (-)
CI01000027_01832797_01839912 DNASE2 coding downstream 307645 1832496 ~ 1839912 (-)
CI01000027_01799404_01801967 NA coding downstream 345466 1799058 ~ 1802091 (-)
CI01000027_02226447_02227499 NA coding upstream 72295 2225781 ~ 2227499 (-)
CI01000027_02240021_02241453 NA coding upstream 86510 2239996 ~ 2241453 (-)
CI01000027_02314898_02317288 NA coding upstream 161065 2314551 ~ 2317308 (-)
CI01000027_02460101_02470648 DPYS coding upstream 306211 2459265 ~ 2470805 (-)
CI01000027_02742168_02773304 NA coding upstream 588682 2742168 ~ 2773304 (-)
G139482 NA non-coding downstream 5645 2137431 ~ 2141912 (-)
G139617 NA non-coding downstream 40585 2106019 ~ 2106972 (-)
G139462 NA non-coding downstream 69995 2072090 ~ 2077562 (-)
G139446 NA non-coding downstream 81678 2064126 ~ 2065879 (-)
G139595 NA non-coding downstream 132064 2015268 ~ 2015493 (-)
G139620 NA non-coding upstream 1091 2154577 ~ 2155037 (-)
G139659 NA non-coding upstream 141984 2295470 ~ 2296334 (-)
G139704 NA non-coding upstream 269419 2422905 ~ 2423200 (-)
G139705 NA non-coding upstream 272234 2425720 ~ 2426596 (-)
CI01000027_01303308_01319462 NR2F5, NR2F1, NR2F1.L, NR2F2 other downstream 827396 1302034 ~ 1321178 (-)
CI01000027_01241417_01245177 NA other downstream 900580 1240478 ~ 1246267 (-)
G139117 NA other downstream 1909978 234212 ~ 237579 (-)
CI01000027_00131884_00132650 NA other downstream 2013755 131395 ~ 132650 (-)
G140118 NA other upstream 1348048 3509352 ~ 3584679 (-)
CI01000027_03787377_03788902 NA other upstream 1633892 3787377 ~ 3790279 (-)
CI01000027_03922380_03931033 NA other upstream 1768910 3922242 ~ 3931033 (-)
G141481 NA other upstream 2218761 4372247 ~ 4412810 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010215 cd22 coding NC_007127.7 CM002900.2 44906324 ~ 44917748 (+)