CI01000027_02234729_02237937


Basic Information

Item Value
gene id CI01000027_02234729_02237937
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 2234729 ~ 2238114 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_02234729_02237937.mRNA
ATGAACCTTGAAAGTAATGGATTGTCTGTGCAGTGCTACCTGAAGCCAAAGCTGATGGGAAAAATGAGAAGAAGAGTTCAGGAGATGAGAAACCCAAACGCTCAGGGGTCTTCAGTGGATCTGAGTCACAATGAAAGCACACGACTGGCTATGGATGCTCTCCTGGACAAAGGGCTTGATGGATACCAGGAAGTGCTGATCAAAGAGAATGAGGCAAACTTTCTGTCTGCGGAGGAGAAAACATATATCTTAAACAACATTAAAAAGCCTCTCACTGACGATGACGAGGCAGACAGAGATGAAGAGCTGTCCAGTTCTCCATCAGTTTCTTCTGAGACATATTTTCCTGCAGTCACAGAGAGTGAACCTCCAGTTCTGGACTACGGCTGGCCGGTGGCTGACTGGAGTTACCATCTGCAAGGCATTCCTAGTGTGGAAGTGTTCTTCCAGTCAGTGAAATCCTCTTCCATGAAAGACCTGCTGCGGGAACTCATCAGGCAAGCAACTACAGTTTTGGCGATAGTTATGGACACATTCAGCGATGTGGAGATTTTCTGTGACATACTGGAGGCGACAAGAAAGCGCAATGTGTACGTCTATCTCCTTCTGGACCACACCAATTTACAGCTGTTTCAGGACATGTGTGAAAATGTAAAAATCAACAAGTCACACCTTAGTAGAATGTCCATTCGTAGTGTTCAAGGTGAGACTTATTGTGCCAAATCGGGCAGAAAGTTCACTGGACAGATGAAAGAGAAGTTCATCATTGTGGACTGCACAAAAGTACTGGTCGGCACGTACAGTCTCACCTGGCTGTCCTGGCAGGTTCACAGAAGCTTGGCCGTACTCTTCAAAGGCAGCGGTGTTAAACCTTTTGACCTGGAGTTTCGCAGACTCTACGCACTTTCTAACCCAGTGCCAGGATATACCTGGCAAACATCAAATCCTGCTGATCTCCACCTACCCTTCAAGAAACTCCAGATCCCGATATGGCCAGCAGGAATTCCCGGAAACACTGCTGACCACCAACAGAAACCTCATAAGCCAGGTAACCCGAGTTTCCCGACTCGTCCTGTCCTGGTCAGGCAGACCAGCTATCCAAGTGTCACCACTGGACCACAAAGATCTCAATGGCTTCCACGGAGGAACTCGATCCATCATCCCACTGCTTGTCAGACCCCCCTCTTCAAAGATTATATGAGAAGCCAAACCTGGCGCCCAATACAGGGGAAACACATCAACAGATGAAGCTGAAGATCAACCTGAAGCTTCCCACTGGTGCTAGAGCAGGTTATTGCAATGCTTAATTTTAGTAAACAATGTGATGCATGTGCTTATTGCATGAATTAGCAGATGTAGCAACTTTATTTATTTTAAAAAGTTCAACTTTATTCTGCTTTGTAACAGTAAAAGCATGTAACTCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_02234729_02237937.mRNA True 1425 mRNA 0.46 4 2234729 2238114

Neighbor

gene id symbol gene type direction distance location
CI01000027_02230213_02233471 NA coding upstream 1238 2230213 ~ 2233491 (+)
CI01000027_02194222_02218628 ARHGAP30, ARHGAP33 coding upstream 14964 2194222 ~ 2219765 (+)
CI01000027_02156853_02161914 RBM42 coding upstream 72725 2156853 ~ 2162004 (+)
CI01000027_02125080_02146147 NA coding upstream 88227 2124834 ~ 2146502 (+)
CI01000027_02106256_02118045 NA coding upstream 116231 2106185 ~ 2118498 (+)
CI01000027_02242334_02250969 DCAF13 coding downstream 4220 2242334 ~ 2251188 (+)
CI01000027_02254195_02308930 NA coding downstream 15789 2253903 ~ 2310086 (+)
CI01000027_02337884_02402668 RIMS2 coding downstream 99770 2337884 ~ 2402668 (+)
CI01000027_02419674_02422700 NA coding downstream 181519 2419633 ~ 2423128 (+)
CI01000027_02429134_02451902 RIMS2A, RIMS2 coding downstream 190892 2427563 ~ 2452535 (+)
G138656 NA non-coding upstream 79647 2154569 ~ 2155082 (+)
G138649 NA non-coding upstream 80988 2149329 ~ 2153741 (+)
G138693 NA non-coding upstream 114936 2119198 ~ 2119793 (+)
G138672 NA non-coding upstream 152677 2077080 ~ 2082052 (+)
G138686 NA non-coding upstream 181794 2052580 ~ 2052935 (+)
G138669 NA non-coding downstream 33255 2271369 ~ 2324059 (+)
G138675 NA non-coding downstream 88778 2326892 ~ 2329110 (+)
G138683 NA non-coding downstream 93875 2331989 ~ 2335650 (+)
G138651 NA non-coding downstream 103090 2341204 ~ 2345765 (+)
G138515 NA other upstream 557869 1664408 ~ 1676860 (+)
G138436 NA other upstream 726913 1506961 ~ 1507816 (+)
G138290 NA other upstream 1235548 995970 ~ 999181 (+)
G138247 NA other upstream 1365154 855388 ~ 893121 (+)
G138238 NA other upstream 1403046 829774 ~ 831683 (+)
G138915 NA other downstream 1246273 3484387 ~ 3486647 (+)
G138953 NA other downstream 1263958 3502072 ~ 3520065 (+)
G140436 NA other downstream 2499284 4737398 ~ 4774262 (+)
G140440 NA other downstream 2542303 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 2810809 5050310 ~ 5055755 (+)

Expression


Co-expression Network