CI01000027_02254195_02308930


Basic Information

Item Value
gene id CI01000027_02254195_02308930
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 2253903 ~ 2310086 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_02254195_02308930.mRNA
CTTTAAAAGGACCAGCTGTATCCATTCTTCTATTGCTCAGAGAATGATTGATCTAATGCTGTAAAATCCACCTTATATAGTCCATGAGCTTGCATTGCTATCATTTCAATAGTTGTATAATAACTTAACCTCTTTTATAGTGTTGTAAAACATCATAACGGTCATCAGAGATGCTGCTGTGGGTGCTTTGATTCCTGAGCAACCAAAATCCACTGATGATTGATCAAATAGACCTTGCATTCATCATGGATTAAGTCTGGTTATTGATCTTCTTCAGCATCGGCGTGTAAAGATGTCTGCTCCAGCTGGGCTCCGCAGCGGGCCTGTCCTGCCGGAGATGCCGGACCTGAGCCACCTCACCGAGGAGGAGAGGAAGATCATCCTCGGTGTCATGGACAGGCAGAAGAAAGAGGAGGAGAAGGAGCAGTCTATGTTGAAATATGCTCATTGTGGCAGCCTGTTAAACATGACTGTAAACATTGTAAAACTGGACAATGGAATTGTAACTGGTTATTTCAGCAGCTCTTGCTATTTTGGTGTACATGTATCAGATGGGTCAAAGAAGATGCAAAGTCTCAGCCAGTCCATGATTGGCTGCCTGCAGTCTGTTATGGCTCTATTAGAAAAGCTTTTGGCAGCTTCATCCACATGTAGGCTGGATGCATCAGTCCTGCTTTATTTTGCTTGTTTGTCAACTCTGTGGTTTCCCTTTAGCGGAATCACTGATCTGGTTAATAACGTTCTCCAGCCCCCAAAGTCCCAAAACCAACTGCAAACAGAGCCTCCAAAGGAGCCGGAGACGAAATTGCACCAGCAATTTGAAATGTATAAGGATCAGGTGAAGAAGATGGGGGATGAGACACAGACCACCCAGGAGCAGAAGAGTGACGCTCCCACCTGCGGAATCTGCCATAAAACCAAGTTTGCCGACGGCTGTGGCCACCTCTGTTCTTATTGCCAAACCAAGTTCTGTGCTCGCTGTGGAGGAAGAGTTTCACTACGCTCTAACAAGGTGATGTGGGTATGCAACCTGTGCCGAAAACAACAAGAAATCCTCACCAAGTCAGGGGCCTGGTTCTACAGCGGCCCAGGGGACGCCCTGCCCCCGGGTGCGAGTGACCCTCGCCGCCGCCACGAAGAGGCTCCGCAGGAGAAGAAGGCCAAACTGCAGGAAGCCCCACTGCTGTATCAGGGGCCTCCAGGGGACCGCAGCCGTGCTCCAGGACTCTCGCGCCAGGCATCCCTCAACAACGACTCCGGTCTGAAGCCCAACGACTCTCTGAGCAACAGAGAGTGTTATAGTTCTGTATTGGTCTTGACTTTACACAACTATGAAAGTGAGCAGCTGCTTTAAAGGTTTGTGCAGTAAGAGGAATTTTGTTGGCCTCTCCGCTTCCATGAATACTTTGCTAACATCAGCTTGATGTTACAAACCGGCAAAATCTTCGAAAAACAGGTTCGTTTACCCAAAGTGCAAATTTAAAGTGTCATTTACTCACACTAAAGTCCTTAAATCTTATTTGTGTTCTCGTTTATTTAATTATGCTGTGTGAAGATGCGTGTTTGAAGTCATTTTAGAGTTGTCAAAAGATACCAAGTCGGTACTGAAATTTTAAAAATGTGACGTTTTGAGCACTTTTGAACGGATTCGTAAACATCTGATTGGCCATTGTGTTCACGCACTCAACAGATATGTCTGTGATTGGCTAATGATCAACGAACGGGAGCATTTGAAAGCACTGAAGTGTTTGAATTTGAAAGCGGGAGTGGGAGCGTTTGAAAGCAGGCGTCTATCAGCGGACCAATTGCAACCTGCTTTCAAACCCTCCCGTGTGTATCTGTGTAAGCGCTCGGTAAAGAGCGTCATTGATGTCTATTTACAACATATTTTTGAAGGGTTGATCATTGTAGCCAGTCACAGACATATCTGTTGAGCACGTGAACACAATGGCCAATCAGAGGCGTTTACGAATCCTCGCAACAGCGCTCAAAGCATCACGTTTTTTAAAAATGTTATTACCGACTTTGTACTGAAGTTACAGGTTCTTTATTTAGTTACAGGTTCTATATTGGCATTGATGTTTCCATGAAGAACCTTTAAAATCAATGGAATCTTTCCATTGCACTTAACTTTTCTGTATAGTGGAAAAGGTTCTTTGGGGAACCAAAATGATTCTTCTTTTTGGCATCACTGCAAAAAACCCCTTTTAGGAACCTTTATTTTTAAGAGTGTACCGACTGCAAGTTTATAAGTTAAATACTGTACAGTAGTTCATATGACATTTGAGAACTGTGGTGGAGATTTTCAGACTTAAATTATGTTAGGATTAGGAATATAGCACACACATGGATGGATTAGTTATGATGCTTTAATGGTGCTCTTTGTCATTTTTGTGGCTTGACAGTCCTGGTCACTGCTGTTGTTGTATGGAACAAAACATGAACATTTTGTGATTTTTTTAAAAAAAAATTTCCCCTTTCTGTATGGAAGTCCATTTCCACACAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_02254195_02308930.mRNA False 2510 mRNA 0.44 8 2253903 2310086

Neighbor

gene id symbol gene type direction distance location
CI01000027_02242334_02250969 DCAF13 coding upstream 2715 2242334 ~ 2251188 (+)
CI01000027_02234729_02237937 NA coding upstream 15789 2234729 ~ 2238114 (+)
CI01000027_02230213_02233471 NA coding upstream 20412 2230213 ~ 2233491 (+)
CI01000027_02194222_02218628 ARHGAP30, ARHGAP33 coding upstream 34138 2194222 ~ 2219765 (+)
CI01000027_02156853_02161914 RBM42 coding upstream 91899 2156853 ~ 2162004 (+)
CI01000027_02337884_02402668 RIMS2 coding downstream 27798 2337884 ~ 2402668 (+)
CI01000027_02419674_02422700 NA coding downstream 109547 2419633 ~ 2423128 (+)
CI01000027_02429134_02451902 RIMS2A, RIMS2 coding downstream 118920 2427563 ~ 2452535 (+)
CI01000027_02455787_02458435 DCSTAMP coding downstream 145067 2455153 ~ 2459044 (+)
CI01000027_02492454_02508459 NA coding downstream 181991 2492077 ~ 2508602 (+)
G138656 NA non-coding upstream 98821 2154569 ~ 2155082 (+)
G138649 NA non-coding upstream 100162 2149329 ~ 2153741 (+)
G138693 NA non-coding upstream 134110 2119198 ~ 2119793 (+)
G138672 NA non-coding upstream 171851 2077080 ~ 2082052 (+)
G138686 NA non-coding upstream 200968 2052580 ~ 2052935 (+)
G138675 NA non-coding downstream 16806 2326892 ~ 2329110 (+)
G138683 NA non-coding downstream 21903 2331989 ~ 2335650 (+)
G138651 NA non-coding downstream 31118 2341204 ~ 2345765 (+)
G138653 NA non-coding downstream 76615 2386701 ~ 2392650 (+)
G138515 NA other upstream 577043 1664408 ~ 1676860 (+)
G138436 NA other upstream 746087 1506961 ~ 1507816 (+)
G138290 NA other upstream 1254722 995970 ~ 999181 (+)
G138247 NA other upstream 1384328 855388 ~ 893121 (+)
G138238 NA other upstream 1422220 829774 ~ 831683 (+)
G138915 NA other downstream 1174301 3484387 ~ 3486647 (+)
G138953 NA other downstream 1191986 3502072 ~ 3520065 (+)
G140436 NA other downstream 2427312 4737398 ~ 4774262 (+)
G140440 NA other downstream 2470331 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 2738837 5050310 ~ 5055755 (+)
G138669 NA non-coding downstream 195 2271369 ~ 2324059 (+)

Expression


Co-expression Network