XLOC_008519 (ywhae1)


Basic Information

Item Value
gene id XLOC_008519
gene name ywhae1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 24746444 ~ 24754895 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017042
tgagagagagagggagtgtgtGGAGATGCTCTGAGTGAAAGTGCCCGGATGAAGGTGTAACGCCATCTTTACTCCACCATTCAAGCCGCAGCTGTTGCTCGCGCAGGGCCTGCCGGTGAACTCACACTCCTCCTTTACTCCCAATCGCTCACGAAACACGCTCCTGCGCGCTCTCCAACATGGGTGACCGGGAGGATTTGGTGTACCAAGCCAAACTCGCCGAGCAGGCAGAGAGATATGACGAAATGGTCGACTCCATGAAGAAAGTGGCTGGGATGGATGTTGAGCTAACGGTGGAGGAGAGAAACCTGCTCTCAGTGGCTTACAAGAACGTTATTGGGGCGAGAAGAGCATCCTGGAGGATAATCAGTAGTATTGAGCAGAAAGAGGAGAATAAGGGTGGAGAGGACAAACTGAAAATGATTCGGGAATACAGGCAAACGGTTGAGAATGAGTTGAAATCAATCTGCAATGACATCCTTGATGTATTGGACAAGCATTTAATCCCAGCTGCAAATTCAGGAGAATCCAAGGTCTTCTACTACAAAATGAAGGGCGATTACCACAGGTATCTCGCTGAGTTTGCCACAGGAAACGACAGGAAGGAGGCTGCAGAAAACAGTTTGGTTGCTTACAAAGCTGCTAGTGATATTGCAATGACAGACCTTCAGCCCACACACCCTATTCGCTTGGGTCTGGCTCTTAACTTCTCTGTATTCTATTATGAAATCCTCAACTCTCCGGACCGTGCGTGCAGGTTGGCAAAGGCGGCATTTGACGATGCTATCGCTGAACTGGACACATTGAGTGAAGAAAGCTACAAGGACTCGACGCTCATCATGCAATTGTTACGTGATAACCTGACACTATGGACTTCAGATATGCAGGGAGATGGTGAGGAACAGAATAAAGAGGCGCTGCAAGATGTGGAGGATGAAAACCAATGAGACAACACCGCCAATATGAGACTCCACCCCACCCCCCTCCCCTTCCCCAAAACCCCACTCACAAAGGGAGCCACCAAGCCCAACCTTATGAGTGGCACTCAACAGCTTGATGCCTCCAGTTTTTCTCTCCctttgtttgatttttaatattattctgttttattagcccttaaattgaaataaaatataccaCTCATGAAACAAACTTCAATTATGATTTTTGAATggtcagaactttttttttttttttttttttttgtcctggtacaatttttttgttcttttttttttttttaatgttcaattgCTTTTTCTCAACATTTTTATCAGTTGCTGGATATATTTTGAGTTTTTcttaatgtaattacagaaattaacttttattactattactgaTATGTCTACTATTAGTGGTTTGAGCTGTAATATTTCTGTGTTAGTGCaattataaaacaaaagaaagaaatgcagTTAAAGAAAACGATTAAATCTTTTAAAAGGGCAAGTCTAAACAAAGTGCTctttataataatttagtttttcagAGAAAGTCGAAGCAAATTTCTTGATATCCATGTGGAGCAAAATGCTTAACATCACAAAGTAGTAGTTATGTAGTAACATTTACCAGTGGTCTGGACTGTAATTTGTGCTAAAATACTGTATTGCTCACATAGGCTGATGattgtggatggatggacggatggctGCAGCTCTAGAAAACTGAAGGAGCCTTGTTGCTTTTAGAACTAAGACAAATGCAGGTCTCCATTTGGCTGtctcaaaaagaaaagaaaagcactaATAAAGTTGATTTTAAGCCTGCATGA
>TCONS_00017043
GAAAGAGGAGAATAAGGGTGGAGAGGACAAACTGAAAATGATTCGGGAATACAGGCAAACGGTTGAGAATGAGTTGAAATCAATCTGCAATGACATCCTTGATGTATTGGACAAGCATTTAATCCCAGCTGCAAATTCAGGAGAATCCAAGGTCTTCTACTACAAAATGAAGGGCGATTACCACAGGTATCTCGCTGAGTTTGCCACAGGAAACGACAGGAAGGAGGCTGCAGAAAACAGTTTGGTTGCTTACAAAGCTGCTAGTGATATTGCAATGACAGACCTTCAGCCCACACACCCTATTCGCTTGGGTCTGGCTCTTAACTTCTCTGTATTCTATTATGAAATCCTCAACTCTCCGGACCGTGCGTGCAGGTTGGCAAAGGCGGCATTTGACGATGCTATCGCTGAACTGGACACATTGAGTGAAGAAAGCTACAAGGACTCGACGCTCATCATGCAATTGTTACGTGATAACCTGACACTATGGACTTCAGATATGCAGGGAGATGATTCCTAAAGGGAAAATGTTAATTGCCCACAAACTTTATTTGTGAGGAACAGAATAAAGAGGCGCTGCAAGATGTGGAGGATGAAAACCAATGAGACAACACCGCCAATATGAGACTCCACCCCACCCCCCTCCCCTTCCCCAAAACCCCACTCACAAAGGGAGCCACCAAGCCCAACCTTATGAGTGGCACTCAACAGCTTGATGCCTCCAGTTTTTCTCTCCctttgtttgatttttaata

Function

symbol description
ywhae1 Predicted to enable monooxygenase activity. Is expressed in several structures, including immature eye; nervous system; otic vesicle; post-vent region; and tail bud. Orthologous to human YWHAE (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon).

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0004497 monooxygenase activity molecular_function
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-779 Predicted to enable monooxygenase activity. Is expressed in several structures, including immature eye; nervous system; otic vesicle; post-vent region; and tail bud. Orthologous to human YWHAE (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon).

Ensembl:

ensembl_id ENSDARG00000006399

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017042 False 1777 mRNA 0.42 6 24746444 24754895
TCONS_00017043 True 755 mRNA 0.46 6 24749985 24754214

Neighbor

gene id symbol gene type direction distance location
XLOC_008518 LRRC75A coding upstream 1524 24691088 ~ 24744920 (+)
XLOC_008517 poldip2 coding upstream 56184 24676905 ~ 24690260 (+)
XLOC_008516 smtnl coding upstream 75025 24644016 ~ 24671419 (+)
XLOC_008515 NA coding upstream 127800 24616570 ~ 24618644 (+)
XLOC_008514 dhrs13b.1 coding upstream 145353 24572926 ~ 24601091 (+)
XLOC_008520 cpda coding downstream 1965 24756860 ~ 24794610 (+)
XLOC_008521 gosr1 coding downstream 40578 24795473 ~ 24837655 (+)
XLOC_008522 NA coding downstream 86396 24841291 ~ 24844913 (+)
XLOC_008523 CR942805.1 coding downstream 207241 24962136 ~ 24962252 (+)
XLOC_008524 NA coding downstream 252660 25007555 ~ 25053314 (+)
XLOC_008463 BX663520.1 misc upstream 3494162 21252191 ~ 21252282 (+)
XLOC_008511 NA non-coding upstream 433322 24312556 ~ 24313122 (+)
XLOC_008508 NA non-coding upstream 540463 24179932 ~ 24205981 (+)
XLOC_008509 NA non-coding upstream 547947 24191710 ~ 24198497 (+)
XLOC_008507 NA non-coding upstream 584344 24149968 ~ 24162100 (+)
XLOC_008525 BX908796.2 non-coding downstream 273587 25028482 ~ 25054730 (+)
XLOC_008526 BX908796.1 non-coding downstream 301066 25055961 ~ 25062073 (+)

Expression


Co-expression Network