XLOC_008520 (cpda)


Basic Information

Item Value
gene id XLOC_008520
gene name cpda
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 24756860 ~ 24794610 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017044
TTGAAACTCCACCCTTTGTTAAAGCGTTAGCAGGAAGTTCTTACTAAAAATACCCCCGACGTCAGGCTAAAGAAAGAACCCGACCCAGCCGGACAGATTTTGGGATTTCATGAGGACGCCAAGGTGCCTTCGGAAACATGTCGGGACAGAGGGCAAGAGACCTGTGTTCAGCGAATAAATGCCCGCTGCTGCTTTTATCTCTGCTCGTTGTTTATATCAGCTCCATCAACTCAGTTTCCGCAGGCGAGCTGAAGACAGAGACTTACAACAAATACTACAATTACGACGAACTTACCGAGCTTCTCAAAAGTCTCGCCGTTAAACACCCCAGCATCGCCAATCTGACCAGCATCGGCAGGTCCGTTGAAGGCAGAGAGCTGTGGGTGATGAGAGTCACCAAAGACATCAGTGCTGCTGATGGAACAGGAAAACCCAAATTCAAGTATGTGGGCAACATGCACGGAGACGAGACCGTGTCCCGACAGGTGTTGGTTTACCTGCTGGAGGACCTACTGGAGAAGTACGGGGAGGATCAGCGGGTCACGGAGCTCGTCAACACCACCGATATTTACATCCTGCCGAGTATGAATCCTGACGGCTTTGAAAGGTCCGTGGAGGGGGATTGTTTGGGCAAAGATGAGGGTCGGCATAATGCTAAAAACATCGACCTGAATAGAAGTTTCCCAGATCAGTTTGAGGAAATACACTTGAATGCAGAAGACATCCCTGAAGTTACTGCTGTCATAAAGTGGATCCTGGAGAACAAATTTGTTCTCTCTGGTAATCTGCACGGCGGGACGGTAGTGGCCAGTTATCCCTATGATGACTCTGCAGGTCATTCTACTGATGGCACCTATAGCAGATCTCCCGATGATGCCCTCTTCAGGCACTTGGCCCTTGTTTACGCAGAGAATAACCCGGTTATGAAAACCGGGCAGCCAAAGTGTGAGGACAACGTGAACGAATCCTTCCCGGATGGCATCACAAATGGAGCAAAGTGGTATGACGTACCAGGGGGTATGCAGGATTTCAATTACCTGAAGGGGAACTGTTTGGAAATCACCATGGAACTCAGCTGCTGCAAATACCCACCCTCATCCCAACTCAAGACCGAATGGGAAAACAATCGTGACGCCCTACTGGCCTACATGGAGCAGATTCATATTGGAGTGCGTGGCTTTGTAAGGGCCGCCAAAAATGAAGCTCCTATCGCTGATGCTGTGATTATGGTTGCGGACATTAAACACAATGTGAGCACCTCACGTTTTGGAGACTACTATCGTCTGTTGCTGCCTGGCACCTACAGCATCACCGCGGTAGCACCGGGCTACATCCCTATGACTGTAGCTGGGGTGGAGGTAAAAGAGGGAAAAGCAACTGTGCTGAATATCACCCTGTTGTCGGAGAATGACGAGAGATCCACAGCCACCCCAAACCCAGAATCCTCCACTGACACCTCTGCCAGCAGCTCTAACAGTGGCAGCACAGACAACAACAGCAACTCTGGTGCCAGCGACAAAGCAGCAGATCTCACAATACAGCCTCAGGAGTTCCGGCATCACCGGTACATTGACATGGAGCTGTTCATGAAGAAATTCAGCTCTGAGTACAGCTCCATCACACGCCTCTATTCCATTGGGAAGTCTGTGCAGAAACGTCTCTTGTGGGTCATGGAGATCTCCAACAATCCTGGTGTCCACGAGTTAGGTGAACCGGAGTTTAAGTATATCGGTAACATGCATGGCAATGAAGTGGTTGGTCGTGAATTGCTCCTCAACCTCATTGAGTACCTGTGTCGCAACTATGGCACTGACCCTGAGGTCACCCAGCTTGTCGACACCACACGGATCCACATCATGCCTTCAATGAACCCGGATGGTTATGAAGTGTCCCAAAAGGGAGATGTCGAAGGCATAAAGGGCCGTAACAACAGTAAGAACTACGACCTGAACCGTAACTTTCCTGACCGGTTCAAACTGATCACCGATCCCATCCAGCCAGAGACCCTGGCTGTGATGAACTGGTCAAAGAACTACTCATTTGTGTTGTCTGCCAACCTTCATGGAGGCTCTCTGGTGGTGAATTATCCATTTGACGATAATCTTGAGGACGTTATCGGATACAGCAAGTCCCCAGATGATGCTGTATTCAGGATGGTGGCTCTCGCTTACTCTCAGGAAAACTCTGAAATGCATGAAGGTCACCCCTGTAAGGAAATGAGTTCATACCCGGAATATTTTCAAGATGGCATCACCAATGGCGCAGCATGGTACAATGTCCACGGAGGAATGCAGGACTGGAACTACATGAACACAAACTGCTTTGAGGTGACTATTGAACTGGGCTGTCACAAATATCCGCCAGTTGCGGATCTGCAGAAATACTGGGAACAAAACCGCAAATCACTTCTGCAGTTCATCCATCAGGTCCACCGTGGAGTAAAAGGAATGGTAATCGACAGCAAAGATGGATCTGGCATTCCCAATGCTACCATCACTGTGGAAACCATCCATCATCAAGTCACATCCAGTTCTTTAGGGGACTACTGGCGCTTACTCGTTCCAGGAAAATACAAGCTGACTGCCTCTGCCCAAGGCTACATGTCAGATAGTTCTTCTGTCACCGTGCCTAAGGACGGATTGGAGATTGTTAATTTCACACTGACCCGGATTCCCACACATGCAAACGGACAGGAGACAGAAAACACAACCCCAGTTTTGGACCCCAGTGTAAGGGAGTTTCAGGCCCTCATCAAGCAGCTGTCAACCCAATCCGGTTTGGACAAACTGATCCAGGACACTCCTACCGAGAGTAGCTTCCGGTACCAGCAGTACGGCGAGGTTTCCGAGTTCCTGCGTGGACTGACACTTAACTTTCCAGAGATTACTTCTCTCCGCAGTCTTGGTCAGAGTGTGGAGATCAGGAATATCTGGGCTCTGGAGATCTCCAACAATCCTAAAGTCCAAGAACCGTCAAAGCCCAAGATCCGATTTGTAGCAGGAATCCATGGAAACGCACCAGTGGGCACAGAGCTGCTTCTGGAGTTTGCTGAAAGTCTCTGTGTAAACTACGGCAAGAATGCAGCCATCAACAGGCTCATAAATGAGACAAGAATTGTTATCCTGCCAAGCATCAACCCAGATGGACGTGAGCTGGCGAAGGAAAGAGACTGCACCTCCACTGTTGGCATGACCAATGTGCATGGCAAAGACCTTGACACTGACTTCATTGgtaATGCATCTCAGCGAGTTTCAGAACCTCAGCCAGAGACACGCGCTGTGATGAATCTGATTCAGGAAAGAGGCTTCACTCTCTCTGTGGCTCTGGATGGAGGCTCATTGTTGGTCACTTATCCATATGACAAACCAGTGCAAACCGTTGAAAATGATGACACACTGAGATATCTGGCCACTGTGTATGCTGATCACCATCCCACAATGCACTTGGGTAACACTGGATGTCCAAACAGCGTCCAAAGTAACATCCCTGGTGGCGTCCTTCGAGCAGCAGTGTGGCACAGTCACATGGGCAGCATGAAGGACTTCAGTGTGGACTTTGGTCACTGTCCCGAGATCACAGTCTACACCAGCTGCTGTCTGTTTCCTTCAGCTGAAATGCTGCCCTCGCTCTGGGCTGAGAACAGGAAGTCTCTTCTGAGCATGCTGGTTGAGGTGCACAAAGGGGTTCGTGGAATAGTCAAGGATAAGAACGGTAAGCCCATCGTGGGTGCTGCAATTGTGTTGAACGGTGGTGTTCGAGTCTACACTAGTGAAGGAGGGTATTTCCATGCTCTTCTGGCTCCTGGTTTACACAGCATTGAAGCGGTGGCTGATGGATACCAACAGCAATCACAGAagGTGTCTGTGTCGCAATTTGAAGCAGCAAGTTCCATTATCATTGAGTTTGACATGGAGAACGATATATTTGGCCTTCCCAGAGAATTAGTAGTGGCGAGTGCAGCTGCCGCAATGACGGCACTAGTCTTGACCGCCTGTATCATCTGGTGCGTCTGCTCGGCCAAATCCAACAGACATAAAGATGGCTTCCATCGACTACGGCAGCATCGAGATGATTATGACGACGAGGTCCGCCTCATGTCTATGGGCTCCAAAAAGTCTCTCCTCAGTCATGAGTTTCAAGATGAGAGCGAAAGTGATGAGGATACACTGTACACCAACAAACTCTGAGTCAGCCCACTGCAAGGCCAGCAGAGGGCGTTCAATGTCCAAAACCGTCGGTAAACCACCACAGGATGCACTTTAATGGCCTGGTGAATTCGGGCAAGCTTTTTTTCACCGTAGTGTATGCAAATAACCACTGCTCTCTCAACCAGCCTGCTTCGTTATCTGGGTCTCCGTAATTCTGGTCCTCTACCCTTTAAAAAGGAAAGCGAAGAGCTAGAGTCCATCTCAACAGGATTATGAAACACTGTGCCTTGTTAGATTAGAGGATGCATGGTCGCTGCTGTGGTGAGGATGACGATTTTCTAGTGTAAATGGAATTTTCCgcccattttctttttttttatccttcTGTGGACCCGGATGGGTCAGGAATCCATCCATATGAGAGTCTGGTCAGATCATCTGGATCATTATGAGTTGTCTTTGCTGTTCTTTTTATGTGCAGCCAACAGAATGGCTAATATTTCACATTATGGGGACTAATTAAGGCATTTCATAAGTGATATTAAAGAGATAGCTCAtccaaaaaaaaatgctgttaatCTACTCGCCTTTAGACAAGATAAGGTATATGTGACTATCTTCAGTAAAACCtgtggagaaaaaaaactgttgctCTTGGTGATTTAGAAAAAGTTAACCAATGCAATTGGCTATAGTCAATACAACTTTAAGTCAGAAAAACTTAAACAGGCAAGAACAACAAGCTTCTGGCCATACGTTTGAGGCCTCATGAAGCAAAACAATAGGTCTGTAAACtgaatattattcatttttatttataaacaaatgttaCAGGAAACgtgttgcatatttaaacatatatgaCGAGAAACTTGCGCTACCCTGGCTCACGCTGCTCCACACTGCCCTGAACACACTCACAACTGTTTTCTGTAGCTGTGgattaaagttaataataattcTGTGCCTTGACAACTGAAAACATCATAAATATCCACAGGGATTCATTTTGTCTTGCCTGTTTTGACTCTCAAAATGCCAGCAGCCactttttatgaatcaccaaggtcTAAAAATTGTCCTTAATGTAGAAGAAAGCTACCAACATATTTGATGGTAAATTACCAGCAAATATTCAAGGTTTTTGGGAAATCCACCAATgggggatagttcacacaaacataaatatgctgtcatcatttacatttactttcatcttccacttgtttcaaacctgttgaacacaaagggagagattttgaagaatgttttaaaaacactaacttccacagtattttttaTGGATGTCATTGGCTGcccaataccccccccccccccccccccccccctctccaccaccaccaccaccattcCTTTAAAGCAAGTAAATGGGCTCAATATATAAACTCTTTATTttcagcagaattttttttttcactttaaactACAAATGCTGGCCTTAACCCATCtcgttgacttctatagtatattTTATAGATGTCAGATATTATATAGATGGCTTTTTTCCTCTtccattattaaaaatactttaattttgtgtttaacagaagaaagaatttaataaaagtttagaaccacttcaATCTGAGAAAATATTAAGGGAATTTTCACTTTTTGGGGTGAATAAGCTCAACAGAGTGCAAATTCCAAATATAAACTCAGTATTTTCAGCAGAACTGttttaaaatttacttttaaactacTAATGCTGGCCTTAATCCATCTCTGTGGATTATATCTCAACATAATTGAGCCCCATTCACTTGTGGAGGAAAATGctgaaatattttcattttcaaaacctCAATTTCTCTTCAGCTAAAAAAAGCAAGCCATTTGCATGTTCGACAGCTCAGGATTGAGTATTAAATCAAgacgtttacatttttttttttggatgaactattcctttaaacatCTCAGACTGCCAGAAATATATTGTCCAAGTTGTTTTCAGACAAATGTAGATATTTACATTAAGCAGTCTCCCATTATTCATAATAAGAGTGACATGTTAGATACATAGCAGACAATTATGCTCAATTACTGCCTTCTCAATTCTCTGTAATTTGGACAATCAGGGATACGGTAAAACCTTAACATAACCTTAAAACTATGGATATGATCATGTTTAGTCAGTGTTTTTGGGTTGTTTTGTCTTATTGTGCACTCTTTACATTGTTGTCCCAGTTtactttttaaacatatttattttagttttatccaTCCAATGAAAGACTCCTCTCAGGCATCCCTGAAAGATCCAGAAGACCGATTTATTGAAATGTCATCACTTAgtttagtgtttctcaaccacgttcctggaggaccaccaacactgcatgttttggatgtctccttagtCTGTTACACCCATTACTGGTCTTTGAGAAACACTTAAAAACTGGTTGAGAAACACTTATttatttgacacatttaaatattatttgcagTTCAGGGCATCCAGTGTATATTTAGATCTCAGTGACCAAGGGAAATCCTGTAAGTCTTTTACAAACTCATCAAATATCTTGCTTTAGACGCTTCATATATGTATgtacaatattgttttttttttttttaatcaatcgcTCACTGTTCTGCCATCTAAAAACAAAAGCAAGTATATGGATGGAGTTATGAAGAGTGGTGAGACTTTGATCATGATCATGCTTTTAAAACGGTGAAGCAAGAATCGTCCTGTTAAACCTTAATAAACAATTAAGACTCTTATTTATAATGCATATCATTCTGTGCCAGACTGATCATTCATACAAGTCAAATGTTGATATCTGGGAGAACGATGTTCGTATGATTTAAGTATTTGTTGATCCCATTGCCGACAATATCTGAAATGAATTTGGCTTGATGTTGATTGTCATGCTTGAATGTAAATTTCTGGGTGTTTGAACAAATACGTTGAACTTTTTTATGTTTGTGCTGatgtttattttcttcttttttatatacaacaATGATTGTAGATATTGAATTGTTGCCAACTATATGTACATTACACAAGTGCAATTCCTGTCAAGAGTGAAAGAACTGCACAAATAAACCTGTTTATGTGTATTAAAGAAACGAATGGTGTGTGTGAAATGAGATGTTAATAAAGATCAGACTTTGTTCTGGATAGTTTTGTGTTTTCCTTTAATGTTGTCATGTTTTGTtgttacttaataaaaaaaacatgatttaaa
>TCONS_00017045
ATGTCGGGACAGAGGGCAAGAGACCTGTGTTCAGCGAATAAATGCCCGCTGCTGCTTTTATCTCTGCTCGTTGTTTATATCAGCTCCATCAACTCAGTTTCCGCAGGCGAGCTGAAGACAGAGACTTACAACAAATACTACAATTACGACGAACTTACCGAGCTTCTCAAAAGTCTCGCCGTTAAACACCCCAGCATCGCCAATCTGACCAGCATCGGCAGGTCCGTTGAAGGCAGAGAGCTGTGGGTGATGAGAGTCACCAAAGACATCAGTGCTGCTGATGGAACAGGAAAACCCAAATTCAAGTATGTGGGCAACATGCACGGAGACGAGACCGTGTCCCGACAGGTGTTGGTTTACCTGCTGGAGGACCTACTGGAGAAGTACGGGGAGGATCAGCGGGTCACGGAGCTCGTCAACACCACCGATATTTACATCCTGCCGAGTATGAATCCTGACGGCTTTGAAAGGTCCGTGGAGGGGGATTGTTTGGGCAAAGATGAGGGTCGGCATAATGCTAAAAACATCGACCTGAATAGAAGTTTCCCAGATCAGTTTGAGGAAATACACTTGAATGCAGAAGACATCCCTGAAGTTACTGCTGTCATAAAGTGGATCCTGGAGAACAAATTTGTTCTCTCTGGTAATCTGCACGGCGGGACGGTAGTGGCCAGTTATCCCTATGATGACTCTGCAGGTCATTCTACTGATGGCACCTATAGCAGATCTCCCGATGATGCCCTCTTCAGGCACTTGGCCCTTGTTTACGCAGAGAATAACCCGGTTATGAAAACCGGGCAGCCAAAGTGTGAGGACAACGTGAACGAATCCTTCCCGGATGGCATCACAAATGGAGCAAAGTGGTATGACGTACCAGGGGGTATGCAGGATTTCAATTACCTGAAGGGGAACTGTTTGGAAATCACCATGGAACTCAGCTGCTGCAAATACCCACCCTCATCCCAACTCAAGACCGAATGGGAAAACAATCGTGACGCCCTACTGGCCTACATGGAGCAGATTCATATTGGAGTGCGTGGCTTTGTAAGGGCCGCCAAAAATGAAGCTCCTATCGCTGATGCTGTGATTATGGTTGCGGACATTAAACACAATGTGAGCACCTCACGTTTTGGAGACTACTATCGTCTGTTGCTGCCTGGCACCTACAGCATCACCGCGGTAGCACCGGGCTACATCCCTATGACTGTAGCTGGGGTGGAGGTAAAAGAGGGAAAAGCAACTGTGCTGAATATCACCCTGTTGTCGGAGAATGACGAGAGATCCACAGCCACCCCAAACCCAGAATCCTCCACTGACACCTCTGCCAGCAGCTCTAACAGTGGCAGCACAGACAACAACAGCAACTCTGGTGCCAGCGACAAAGCAGCAGATCTCACAATACAGCCTCAGGAGTTCCGGCATCACCGGTACATTGACATGGAGCTGTTCATGAAGAAATTCAGCTCTGAGTACAGCTCCATCACACGCCTCTATTCCATTGGGAAGTCTGTGCAGAAACGTCTCTTGTGGGTCATGGAGATCTCCAACAATCCTGGTGTCCACGAGTTAGGTGAACCGGAGTTTAAGTATATCGGTAACATGCATGGCAATGAAGTGGTTGGTCGTGAATTGCTCCTCAACCTCATTGAGTACCTGTGTCGCAACTATGGCACTGACCCTGAGGTCACCCAGCTTGTCGACACCACACGGATCCACATCATGCCTTCAATGAACCCGGATGGTTATGAAGTGTCCCAAAAGGGAGATGTCGAAGGCATAAAGGGCCGTAACAACAGTAAGAACTACGACCTGAACCGTAACTTTCCTGACCGGTTCAAACTGATCACCGATCCCATCCAGCCAGAGACCCTGGCTGTGATGAACTGGTCAAAGAACTACTCATTTGTGTTGTCTGCCAACCTTCATGGAGGCTCTCTGGTGGTGAATTATCCATTTGACGATAATCTTGAGGACGTTATCGGATACAGCAAGTCCCCAGATGATGCTGTATTCAGGATGGTGGCTCTCGCTTACTCTCAGGAAAACTCTGAAATGCATGAAGGTCACCCCTGTAAGGAAATGAGTTCATACCCGGAATATTTTCAAGATGGCATCACCAATGGCGCAGCATGGTACAATGTCCACGGAGGAATGCAGGACTGGAACTACATGAACACAAACTGCTTTGAGGTGACTATTGAACTGGGCTGTCACAAATATCCGCCAGTTGCGGATCTGCAGAAATACTGGGAACAAAACCGCAAATCACTTCTGCAGTTCATCCATCAGGTCCACCGTGGAGTAAAAGGAATGGTAATCGACAGCAAAGATGGATCTGGCATTCCCAATGCTACCATCACTGTGGAAACCATCCATCATCAAGTCACATCCAGTTCTTTAGGGGACTACTGGCGCTTACTCGTTCCAGGAAAATACAAGCTGACTGCCTCTGCCCAAGGCTACATGTCAGATAGTTCTTCTGTCACCGTGCCTAAGGACGGATTGGAGATTGTTAATTTCACACTGACCCGGATTCCCACACATGCAAACGGACAGGAGACAGAAAACACAACCCCAGTTTTGGACCCCAGTGTAAGGGAGTTTCAGGCCCTCATCAAGCAGCTGTCAACCCAATCCGGTTTGGACAAACTGATCCAGGACACTCCTACCGAGAGTAGCTTCCGGTACCAGCAGTACGGCGAGGTTTCCGAGTTCCTGCGTGGACTGACACTTAACTTTCCAGAGATTACTTCTCTCCGCAGTCTTGGTCAGAGTGTGGAGATCAGGAATATCTGGGCTCTGGAGATCTCCAACAATCCTAAAGTCCAAGAACCGTCAAAGCCCAAGATCCGATTTGTAGCAGGAATCCATGGAAACGCACCAGTGGGCACAGAGCTGCTTCTGGAGTTTGCTGAAAGTCTCTGTGTAAACTACGGCAAGAATGCAGCCATCAACAGGCTCATAAATGAGACAAGAATTGTTATCCTGCCAAGCATCAACCCAGATGGACGTGAGCTGGCGAAGGAAAGAGACTGCACCTCCACTGTTGGCATGACCAATGTGCATGGCAAAGACCTTGACACTGACTTCATTGtaggtaATGCATCTCAGCGAGTTTCAGAACCTCAGCCAGAGACACGCGCTGTGATGAATCTGATTCAGGAAAGAGGCTTCACTCTCTCTGTGGCTCTGGATGGAGGCTCATTGTTGGTCACTTATCCATATGACAAACCAGTGCAAACCGTTGAAAATGATGACACACTGAGATATCTGGCCACTGTGTATGCTGATCACCATCCCACAATGCACTTGGGTAACACTGGATGTCCAAACAGCGTCCAAAGTAACATCCCTGGTGGCGTCCTTCGAGCAGCAGTGTGGCACAGTCACATGGGCAGCATGAAGGACTTCAGTGTGGACTTTGGTCACTGTCCCGAGATCACAGTCTACACCAGCTGCTGTCTGTTTCCTTCAGCTGAAATGCTGCCCTCGCTCTGGGCTGAGAACAGGAAGTCTCTTCTGAGCATGCTGGTTGAGGTGCACAAAGGGGTTCGTGGAATAGTCAAGGATAAGAACGGTAAGCCCATCGTGGGTGCTGCAATTGTGTTGAACGGTGGTGTTCGAGTCTACACTAGTGAAGGAGGGTATTTCCATGCTCTTCTGGCTCCTGGTTTACACAGCATTGAAGCGGTGGCTGATGGATACCAACAGCAATCACAGAagGTGTCTGTGTCGCAATTTGAAGCAGCAAGTTCCATTATCATTGAGTTTGACATGGAGAACGATATATTTGGCCTTCCCAGAGAATTAGTAGTGGCGAGTGCAGCTGCCGCAATGACGGCACTAGTCTTGACCGCCTGTATCATCTGGTGCGTCTGCTCGGCCAAATCCAACAGACATAAAGATGGCTTCCATCGACTACGGCAGCATCGAGATGATTATGACGACGAGGTCCGCCTCATGTCTATGGGCTCCAAAAAGTCTCTCCTCAGTCATGAGTTTCAAGATGAGAGCGAAAGTGATGAGGATACACTGTACACCAACAAACTCTGA

Function

symbol description
cpda Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in peptide metabolic process and protein processing. Predicted to act upstream of or within proteolysis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. Orthologous to human CPD (carboxypeptidase D).

GO:

id name namespace
GO:0016485 protein processing biological_process
GO:0006508 proteolysis biological_process
GO:0006518 peptide metabolic process biological_process
GO:0005615 extracellular space cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004181 metallocarboxypeptidase activity molecular_function
GO:0004185 serine-type carboxypeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
ko00230 Purine metabolism
ko02025 Biofilm formation - Pseudomonas aeruginosa

ZFIN:

id description
ZDB-GENE-081112-2 Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in peptide metabolic process and protein processing. Predicted to act upstream of or within proteolysis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. Orthologous to human CPD (carboxypeptidase D).

Ensembl:

ensembl_id ENSDARG00000055648

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017044 False 7372 mRNA 0.43 21 24756860 24794610
TCONS_00017045 True 4053 mRNA 0.49 21 24756997 24791425

Neighbor

gene id symbol gene type direction distance location
XLOC_008519 ywhae1 coding upstream 1965 24746444 ~ 24754895 (+)
XLOC_008518 LRRC75A coding upstream 11940 24691088 ~ 24744920 (+)
XLOC_008517 poldip2 coding upstream 66600 24676905 ~ 24690260 (+)
XLOC_008516 smtnl coding upstream 85441 24644016 ~ 24671419 (+)
XLOC_008515 NA coding upstream 138216 24616570 ~ 24618644 (+)
XLOC_008521 gosr1 coding downstream 863 24795473 ~ 24837655 (+)
XLOC_008522 NA coding downstream 46681 24841291 ~ 24844913 (+)
XLOC_008523 CR942805.1 coding downstream 167526 24962136 ~ 24962252 (+)
XLOC_008524 NA coding downstream 212945 25007555 ~ 25053314 (+)
XLOC_008525 BX908796.2 coding downstream 233872 25028482 ~ 25054730 (+)
XLOC_008463 BX663520.1 misc upstream 3504578 21252191 ~ 21252282 (+)
XLOC_008511 NA non-coding upstream 443738 24312556 ~ 24313122 (+)
XLOC_008508 NA non-coding upstream 550879 24179932 ~ 24205981 (+)
XLOC_008509 NA non-coding upstream 558363 24191710 ~ 24198497 (+)
XLOC_008507 NA non-coding upstream 594760 24149968 ~ 24162100 (+)
XLOC_008526 BX908796.1 non-coding downstream 261351 25055961 ~ 25062073 (+)

Expression


Co-expression Network