CI01000027_03142352_03156415


Basic Information

Item Value
gene id CI01000027_03142352_03156415
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 3142110 ~ 3157077 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_03142352_03156415.mRNA
ATATAAAAAGATATTGTGATAATATCATTATAATTCAGTTGCTTGTGACTCATTCCATTCTGCTGTCAGAAGAAGAGCCATTAGCAGAATGCGTTTAGTGGAGTATGAGTAAGAGATGAGTAAAGTTGTTGTGGTCTGAGGTTTTTCATCTTTCTTCCTGCTGCGCTTAAGGCAGTCTCATCAGAGGAAGTGAGACCCAGTCACTCGCTGTTTCGCTAGCTGATCAGAACAGGTCTGTTAGGATGGCAGGATTGTTCAGGATTTGGATGTTTAAGGTTCTCTTCTTTGGATTGATAGACCCATCTCAGGCCTCCCTGCGTCCTCGTGTGTCATTTCCTCAGGGAAGTTCAGAGCGTCTCTTGAGCATCTACAGCAGCTCTAATGTGAAGAACACCACCACTCTGTTGCTCAGCACTGATGCTGACACACTGTTTGTTGGAGCTCAGGATGCTTTGCTCTCCCTAGATGTCAGTCAACCAGACAGTATTACACTCAAAGACGAGTTGGAATGGAAAGCATCTAGAGGAAACCTGCTAACCTGCAAAATGGCCTCAAAAAAGGATTGTGGCAACTTCATCAGTATTTTACAGTTTTTCAACTCTACACACCTTTATGCCTGCGGGACAAATGCATATGGACCACAAGGCATCATCATTCCAGCAAGTTCTCTGAATGCCAGCAGAGACACAAAGAATGCCAAAAACTGCTGTCCCTACAGCTCCACCCAGAGGAACACAGCCATCATTGTTGACCCTGTATTCATCAGTTCAACACATGTTGCCAGTGAAGGAAAGATCCTGCTGTTCTTTACTGAGACTGGGGACTTGACTGGAGACTACTTGGTGAACTCTTTTATTGTGTCTCGTGTGGCCCAGGTCTGCACGGATGACAACGGAGGGAGCCTTACCTTACAGAAACGCTGGACATCCTTTGCTAAGGCTCAGCTGGTCTGCCAACAAGGGGAAGATCTCCAGTTCAACAAGCTGGAGGATATTGTCAAGTTGTCCCCACCGGACAATGAGTCTTCTGACAGCACTCTGTTTTACGGGGTCTTTACCTCACAATGGTCAGTTTCGTCTGGTCAGTCAGCAGTGTGTGCTTTCAGTTTAGCAGAAATTAAAGCAGCTTTTTCAGGGGATTACAAGACATTCGATTTGGAAGGAAATCATTGGTCACGTCAGCCAAATGCAGACAAAAAACTCGGCAAGGACGTGGAAAGCGGAAATGTCAGCGAACAGTGCAAAGAGTTCACAAATACTACTGCTACAGTGATACGGAATGCACAGTTGAATGAGACTGTGGTTCTACCATGTCCGGTGAGATCCAGACTGGCGGAGGTGACTTGGAGATTTTCAAACAACAGCGTTGTTCCCCGATGTCCATACCTGCAGCATGCCAACCACAGCCTGGTCTTCCCTATCACTCCAGAGACTTTGAACACCTACCGCTGCATGTCGAAGGAGCTGGGCTTTGAGCAAATAATTGCCGCCTTCACTGTAAATCTCTCGCCCATCCCTCGTTCTCTTCCTCCCACATCACACCAGCAACCTGACATCACCCTGGACACGGAAATAGAGCCCATCCCTGATTACTACACAACACTCGAGTTTGATGAATCTGATTCTAAACCTACAAAAAATGAAAAGACAAATGCATTTATGACACCAGACAGGAGCGGTGAAAAACAGCCCAGGACTAATCGTGAATCTACTGTAAACATCAACACCTCTGGACAAGACGCTGTTTGCATCTCACAGAAGAGTTACTACACTGAAATGGTTGCTTTTTGCATTTTGTTTGTCATTTGTTTCTTTGTATTTGTTGCTTTTGTGATCCTGTGGAGAAAAAGCATGAGGTGCAACAAAACCACCCCTCAGAAACAAACTAAAGACACTGAGTCAGACAATATCTGGCAAACAGAACTGGATGAAAAGCAAAGCTGAACCCTAAAACCAGCACTATCTGTAAGTTTACGAAAAACTAAGGAGTGATTCTTGACCCGTAATTAGTTTGGAAAATAACAACATTTCCATTTTGAAATTAATCTGATTTGATCGCTAGAATGCCAACAGTACATTTCATGATATTTATAATCATTTGATTTTATTTATAGTTAATAATTTTAGATAATCATACTTGAATTTTTTTAGTTTCAGTACACAAAAACCTCATAAAAACGTTGGGATGTGATCTAGAACCTTTATACAGCGGATGCCATTGTAAAGACTGTAAGACTGTCGAATATGGCATCTACTTTGACTAAGGTTTATTGTAACTAGGGTAGCAAAATTCCTGGAATTTTCAAAGTTAGAAAGTTTTCATGGGAATTAATGGGAAATTATGGGAATAAACTGGAAATTTGCAAAATTGCAGGTTAACCTATAGCAGGGAACTTAAATGTAGTTGAAAATAAAACATCTTGCAGCATAATCTTGGTTAAAACAACTAGATTTAATGCAAATTCAGTTGAATTTCTACTTTCTTTTTACATTTTCAATGGGACTTTTTTTGTCATAAGGAATATGTTTATTATATTCAACATTCATGATTTTTTTGTCATGCTTTTTTGTTCAATGAAAGAGTTGATTGAAAATTCTACTCACAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_03142352_03156415.mRNA True 2605 mRNA 0.41 10 3142110 3157077

Neighbor

gene id symbol gene type direction distance location
CI01000027_03110196_03113083 NA coding upstream 28701 3109207 ~ 3113409 (+)
CI01000027_03014464_03027710 E430025E21RIK, STRUMPELLIN, KIAA0196 coding upstream 114248 3013856 ~ 3027862 (+)
CI01000027_03008262_03011156 NA coding upstream 130115 3008262 ~ 3011995 (+)
CI01000027_02995394_03005981 ATAD2 coding upstream 136113 2995394 ~ 3005997 (+)
CI01000027_02991231_02994560 PSMA2 coding upstream 147393 2991231 ~ 2994717 (+)
CI01000027_03159177_03163102 NA coding downstream 1892 3158969 ~ 3163325 (+)
CI01000027_03174793_03181990 NA coding downstream 17716 3174793 ~ 3182308 (+)
CI01000027_03202787_03208051 MTX1A coding downstream 45710 3202787 ~ 3208301 (+)
CI01000027_03212432_03231800 THBS3, THBS3A coding downstream 55355 3212432 ~ 3231862 (+)
CI01000027_03233523_03240000 HFE2 coding downstream 76446 3233523 ~ 3240002 (+)
G138836 NA non-coding upstream 5243 3129459 ~ 3136867 (+)
G138835 NA non-coding upstream 14168 3127355 ~ 3127942 (+)
G138834 NA non-coding upstream 14835 3127043 ~ 3127275 (+)
G138833 NA non-coding upstream 16435 3125449 ~ 3125675 (+)
G138832 NA non-coding upstream 17081 3124797 ~ 3125029 (+)
G138859 NA non-coding downstream 34543 3191620 ~ 3191938 (+)
G138888 NA non-coding downstream 91401 3248478 ~ 3248706 (+)
G138892 NA non-coding downstream 97853 3254930 ~ 3255207 (+)
G138884 NA non-coding downstream 152753 3309830 ~ 3314832 (+)
G138904 NA non-coding downstream 162206 3319283 ~ 3320531 (+)
G138515 NA other upstream 1465250 1664408 ~ 1676860 (+)
G138436 NA other upstream 1634294 1506961 ~ 1507816 (+)
G138290 NA other upstream 2142929 995970 ~ 999181 (+)
G138247 NA other upstream 2272535 855388 ~ 893121 (+)
G138238 NA other upstream 2310427 829774 ~ 831683 (+)
G138915 NA other downstream 327310 3484387 ~ 3486647 (+)
G138953 NA other downstream 344995 3502072 ~ 3520065 (+)
G140436 NA other downstream 1580321 4737398 ~ 4774262 (+)
G140440 NA other downstream 1623340 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 1891846 5050310 ~ 5055755 (+)

Expression


Co-expression Network