CI01000027_03159177_03163102


Basic Information

Item Value
gene id CI01000027_03159177_03163102
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 3158969 ~ 3163325 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_03159177_03163102.mRNA
CTATAAGTAGAATAAATAACTACATAATTCAGTTTCAACATAGTTTTAAATAACATTGTTTACAGCATTCTTAAGCAAACTAAAAAATAGATCTGAAAATTATAATTTTAATAAGGAAATGAGAAGCCAGTTTGGCAAGTTCTCATGTGTTTTTTGCTTCCTTGTTGTTGCAGCATAAAAGTAAAAGTGAGCCTCATTACTGTGAGATATGGCCTCTTCAATGACTACTGAGGCAAATGGAGTGAGGGTAGTGACTCATGTAATCCCACTTGAGGAGAAAATGGAGTCTCCGGAGTCGGACCTAAAGGCGAGCTTGGTCAAACAAGAAAAGTCCAACCTGCCACCAAAAACAAGGATGTTCCTGAGGGGGAAGCCTCTGTCACTGGGGTTGGTGCAGGTTTTTACTGGTTTGATAATCATGACTCTGTGCACAGTCACACTACTTGTCGGCATGCTACATGCTGACATTGTAGTCTTCCTTGGACTTCCCTTTGTCATATCTGGATTTGTGGCAATTGCTGCACACAAGAGATCCAGTCCTGCTCTGATTAAAGCCACACTGGCCATGAACGTGATCTGTGTTCTGCTGGCTGCTGCAGGAACCGGATATTTCAGTTGGGAGCTCAGCATCAGACCGGGGAATGACCCTTGTAACAACGGAAATTATTGGACATGTGCAAATATGTTTTGGAGGTTTCATAATTTGATGGATGGAGTGAGGGGTCTTCTGCTGGTGCTGTCTTTTCTTCAACTGTGCATGAGCATCTCTCTGTCAATCTTTTCTGGCCGGGCCATCGTCCAGGATGAAACTGATGCTGATCCCTATGGCAGTGACTGCAGTCTCCTGAAGGTTGGGTTGGATTGCCCCTCCAACCCCTGAACGGCCACACACTTATGACCAAGGCATATCTAGCCAAAAGTTTAATCATCACATAGGCTAAACTTTATAACATTTGCTTTCTTTCTTTTTGATGGAATTGTTTGATATAATACAGCCATTTCCCATTAGATGGTTTGTCATTTTTGCGGTATCATCTGGTATACACGTTTCTGTGCAGGAATGTTCTGTGGGACCTATAGCACACTTCTTACTGATTTTATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_03159177_03163102.mRNA True 1103 mRNA 0.42 6 3158969 3163325

Neighbor

gene id symbol gene type direction distance location
CI01000027_03142352_03156415 NA coding upstream 1892 3142110 ~ 3157077 (+)
CI01000027_03110196_03113083 NA coding upstream 45560 3109207 ~ 3113409 (+)
CI01000027_03014464_03027710 E430025E21RIK, STRUMPELLIN, KIAA0196 coding upstream 131107 3013856 ~ 3027862 (+)
CI01000027_03008262_03011156 NA coding upstream 146974 3008262 ~ 3011995 (+)
CI01000027_02995394_03005981 ATAD2 coding upstream 152972 2995394 ~ 3005997 (+)
CI01000027_03174793_03181990 NA coding downstream 11468 3174793 ~ 3182308 (+)
CI01000027_03202787_03208051 MTX1A coding downstream 39462 3202787 ~ 3208301 (+)
CI01000027_03212432_03231800 THBS3, THBS3A coding downstream 49107 3212432 ~ 3231862 (+)
CI01000027_03233523_03240000 HFE2 coding downstream 70198 3233523 ~ 3240002 (+)
CI01000027_03243374_03247133 TXNIP, TXNIPB coding downstream 79829 3243154 ~ 3247170 (+)
G138836 NA non-coding upstream 22102 3129459 ~ 3136867 (+)
G138835 NA non-coding upstream 31027 3127355 ~ 3127942 (+)
G138834 NA non-coding upstream 31694 3127043 ~ 3127275 (+)
G138833 NA non-coding upstream 33294 3125449 ~ 3125675 (+)
G138832 NA non-coding upstream 33940 3124797 ~ 3125029 (+)
G138859 NA non-coding downstream 28295 3191620 ~ 3191938 (+)
G138888 NA non-coding downstream 85153 3248478 ~ 3248706 (+)
G138892 NA non-coding downstream 91605 3254930 ~ 3255207 (+)
G138884 NA non-coding downstream 146505 3309830 ~ 3314832 (+)
G138904 NA non-coding downstream 155958 3319283 ~ 3320531 (+)
G138515 NA other upstream 1482109 1664408 ~ 1676860 (+)
G138436 NA other upstream 1651153 1506961 ~ 1507816 (+)
G138290 NA other upstream 2159788 995970 ~ 999181 (+)
G138247 NA other upstream 2289394 855388 ~ 893121 (+)
G138238 NA other upstream 2327286 829774 ~ 831683 (+)
G138915 NA other downstream 321062 3484387 ~ 3486647 (+)
G138953 NA other downstream 338747 3502072 ~ 3520065 (+)
G140436 NA other downstream 1574073 4737398 ~ 4774262 (+)
G140440 NA other downstream 1617092 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 1885598 5050310 ~ 5055755 (+)

Expression


Co-expression Network