CI01000027_03694455_03710634


Basic Information

Item Value
gene id CI01000027_03694455_03710634
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 3694227 ~ 3711039 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_03694455_03710634.mRNA
AGATATATTTCTCTGTTTATATGGGGATGAGCTTATTTGGTTACTAAAGTTTGCTTTACTTGTACTGTATCTAGATTCATTGTCGCACAATACAGAGTGGATTCCATATGATAAAATATCAATAACTTTTGGAGAAACTGTTCACAAGAGTGGGATAAGATTGAGATCCTTGTTGAGACAGGACCCCCCACTTCAATTTTCCAATCCAGATAATTCAGCAGCTGACAAGGAAACCAGAGCTAAACCTGGAAGTGTTGGTAGCCTTAAGGGTGTGGGTGGGGGTCTCAATTTTCAACACCATTTACCCCATCACTCTTGCTAAAAATAGCAGGCGTTTCTTATATTCTGTCTAGGTATCCTACAGTAGCTTAAATTAGTCAAAAAAGGCAGGTGCGTTTGGAAACAATGGTTGTGTTGCCACTTTCCTCAGTTACAATCTCAATCCTGATAGGCAAAAAATGCAGCTCCAGAACAGCTCCTCAAATCTCCCTGCCCTCCCTTTCTGCTAACGCGCGTTCATGGGTGCTACATTCTCCACCCCCTGTGTGCGCGTTCGTAGGGTCTGTTGCTATCCAACGCCACGGCAGCTTACGCGCGATTGGTCAGAAGTGGTCCCCGTTGCTGTTTGAATTGGTCAGCTTGGTATGTGGGCGGAGAAGAGACGAGAGACTGCCCTTTCCCCTAGCTCCTTGTTGTCTCCAAAATACGCCGCGGAAACAGGATGACGTGCCCGCGGAAATAACACAAGACTTCAGACTACAAAGAATGAATGCGTCGGAAAGGCAACCTGTTCAGACTGTAGTTGATTTTCCTAGCACATCCGCAATGGTTGTCGTACCTTCAAAACAAAATAGTATTGATTCATTTACGAAGGGAATGGAAAGTGCCCACATCACAACCTGCACCATATACCGAAGCCAGACTGAGAAAAAGTGTCATCCATACTGTTGTAAAAGAGATTATAAGTTGGTCTGTATATAAGAGATGTCCTATGTGATTTCTGTAAGAGTACCATCTGTGCTTTTAGGATCCAACTTTCCATTTCTTCCTACCTTCATCAAAAGTCACCAACTCCTGACTAAATTACAGCTACTAGCCTCTCTCATACCCTAGGTACTCACCAAGCCAGTTCAACATCTACAAAGCCCACTGTGTGCTTTTCATTACCAATTTATGAGCCACTGGAAGCAGGAGGAAAACTACATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_03694455_03710634.mRNA True 1209 mRNA 0.44 4 3694227 3711039

Neighbor

gene id symbol gene type direction distance location
CI01000027_03689861_03690969 NA coding downstream 3016 3689439 ~ 3691211 (-)
CI01000027_03513546_03521352 NA coding downstream 172875 3512392 ~ 3521352 (-)
CI01000027_03501726_03510058 NA coding downstream 184169 3501120 ~ 3510058 (-)
CI01000027_03492624_03493292 NA coding downstream 200935 3492500 ~ 3493292 (-)
CI01000027_03484797_03490716 HERPUD2 coding downstream 203274 3484742 ~ 3490953 (-)
CI01000027_03750919_03761043 FLI1, FLI1B coding upstream 39791 3750830 ~ 3761063 (-)
CI01000027_03787377_03788902 NA coding upstream 76338 3787377 ~ 3790279 (-)
CI01000027_03832200_03836030 NA coding upstream 120166 3831205 ~ 3836530 (-)
CI01000027_03898513_03905519 NA coding upstream 186227 3897266 ~ 3906494 (-)
CI01000027_03922380_03931033 NA coding upstream 211203 3922242 ~ 3931033 (-)
G140202 NA non-coding downstream 1008 3692874 ~ 3693219 (-)
G140201 NA non-coding downstream 1768 3692092 ~ 3692459 (-)
G140200 NA non-coding downstream 2540 3691470 ~ 3691687 (-)
G140199 NA non-coding downstream 21984 3671941 ~ 3672243 (-)
G140217 NA non-coding upstream 30208 3741247 ~ 3742011 (-)
G140218 NA non-coding upstream 32109 3743148 ~ 3743394 (-)
G140167 NA non-coding upstream 35840 3746879 ~ 3750039 (-)
G140220 NA non-coding upstream 62475 3773514 ~ 3774550 (-)
G140221 NA non-coding upstream 63817 3774856 ~ 3775080 (-)
G140118 NA other downstream 109548 3509352 ~ 3584679 (-)
CI01000027_02226447_02227499 NA other downstream 1466202 2225781 ~ 2227499 (-)
CI01000027_02119227_02124423 NA other downstream 1568199 2119131 ~ 2125142 (-)
CI01000027_01303308_01319462 NR2F5, NR2F1, NR2F1.L, NR2F2 other downstream 2374066 1302034 ~ 1321178 (-)
CI01000027_01241417_01245177 NA other downstream 2447250 1240478 ~ 1246267 (-)
G141481 NA other upstream 661208 4372247 ~ 4412810 (-)
G141488 NA other upstream 796436 4507475 ~ 4508971 (-)
G141728 NA other upstream 1166028 4877067 ~ 4877766 (-)

Expression


Co-expression Network