CI01000027_03771203_03774232 (ETV2)



Basic Information


Item Value
gene id CI01000027_03771203_03774232
gene name ETV2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 3769395 ~ 3774519 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000027_03771203_03774232.mRNA
GTATAAAAACATCGTGAATTTAGAGACTTATAGCAAGGGCGTGCGCGTGTGGAGGTGACATGGGAATTTGACACTGATTGTATCCTCTTCAGTGAGCGAGCTCCTTCAATCACGACTCAGCCCTTGCACGATTTGGCAACTTACTTTTCCAGATGTATTTTTTCTGCACGCCGGAGGAAAATGGCCTGAGGTGTTTGTTTATACAAGACCCTTGGGTTGGTCTTATCTGTCCAAAGCACTCACGCCGTGATTTCAGGCCTCCTCGACTCGGAATTTCACAGACCATTGTTCTCTTGAATGGCTTTTAAAGATACGAACGCCTCATTAAAAGCAAAGTTGCTGGTTCTGATTGATCTTATTTCTAACTTCCAGTTAGAACATTTTTCCTCTCGCAACTTTATAATAATGCATGGGTTTGGTGATAGTAAACCCCAACAAATTAACATTAATTGTTCAAGTTTCAGCTTGGCCTATAGGTCTATTCACTTGTCATTTTGATGTCAAATATTAGGTTATAGGCTATATTTCCAATAAAAATCGACTCGATGCAATTCAAACGTGGCCTATAATTTATATTCTTACATATTTCGTATACTAAATCCCAACTTAAAACAAGTAACATGCAAAACAAAACGAAAACGTTGCTGTTAGTCTACATTCCTATTCTAAATGGCCTGTCAAATCATTATAATAGTAGGCCTATGCTAATTATTGTTGTTATTAGGCTAGCACTAGCCGTAGTTAATAAAAAGTCATAGGGCTTTGCTTATAGAATTCATAAGAGTTTGAAACACTTTTTAGTAGCCTAGCCTACTATGGACCTAATTCATGGTAGACGCCATTTTAAATTTTTCGTGAATGAAAGGCTGCGAGGGACAGATGTACAGCCCGTTCGATTTACTTACTTACTTACTTATTTATTTATTTATTTATGTATTTATTTATTTATTCGTCTGTTGATCCAGTCACATTTTGACCACATATTCCATAATTTCTTCAATATTGTTTCCTGAGTCACCAGGATATTGTTTTAGATTTTCAGTGTTTCGTCAAGCTGATTGATCAACATTTAGGCCTATTCAGAACAGTAGGCCCAATTAAACGGACTGTAATTTAATTCGCGAAACCGTAGTAGCCTATGGCGTCTACCCTTAATAGGGTTCATATCGTAACATCGTTTCAGTCTTTTAATCTTATATCGAGTCAAAACGATATTTTTACGTCAAACGGTCTTGTATTTGGAAAAAAATAAATGTAAAGGGACATGTCAGTCAAATCTGTCTAGTGGTGTTTTTTCTACTCCCCATAGACACCTTTTCTGTGAATGGAAGGGTAACAAATCTGTGGTCGTGACTCCTGTCTGACGTCACTATTAGTAAAAGGAGGGAACCGCAGTCACGACGCATTCCTTCACAAGACGCGCGGACACGCCCCATCGCGCACGGCCTCTTTATAACGGTCCTGACTGAAGCACCAACAGTCAACAGGATTGTAAGGCAGCGCTTGAGGCTGTAGAAAATCCTTAATATCTGGAATAAGGACTCTGTGAGAACTTTAAGGTAAGGTTTTCTATTTATCTGTCAATTGTAATCTGAGATTCTTAATCTGTATTATCAGTGTTTGAATCACTGACTGGCATTAAAAATACTGTTTTACACCCACTGATATGTTTAATAAATTATACTAAAGGATTTGAGAATAAGAGTTTTTAATGGGATATTTAGGCCGACCAAACAAAACTAACCCAATGAAGCAAATACACATTCTATATTAAGATTAAATATCTAATATGCTGTTTTTCTTCAGATATGGAAATGTACCAAGCTGGATTTTACACAGAAGACTTCAGAACTCAAGAGGTTCCTGGTGGTTTTGACTTCAGCTCATATGACTGCAGTGGTGAAGACCTGTCCTTTTTATTAGACAGCAAAGGACCTGCCCAACAGCAGTATCCAGAAACCTATTCAGAGCCCCAGAAGGAGCATTTGCACAGTGCTAAAGGTCATACTCTTGTAGACTCTGGACTGTTTAATCTGGACTCCTTCCCTGAGTTTAGCTGCTGGGCATCATACACTAACATTCCAGAAGGAATGGTAGCAGACAGGCAGCAGGTTGCCTTTCAGGAATCTACTCAAACCTACCAGAACCTCGTCCCTCTATGCACTCCAGCACAAAGTAGCCCATTCAGCCCAGGGATGGACACCAGCAGCCATTACCAACCTGGGAAAGGTCCGAGTCAAAGAGGAGCAACCGGTACTGTCAGTCTGGACCATTTGGGTGATACAGAGAGACCATATGCCTTGTATGAAGCAGAGCAGCAAAGCAGGCCTTCATATTGGTCCGACTACCCCTCACCCAGTTACTGCACTTCCATGCTTGGGCAGCAGACATCCTCTTCATCACCTCCAGTTACTCAATCCTCTGAGCTATTTTGCCCCCGTGTGGCCAAAAGGCGTAGCGCACCAGCTCAAAGATCAGACAGGGAGGGTGAAATGACACCAATGTCTGCCTACCCAGGATCTGGGCCTATACAGCTTTGGCAGTTTCTGCTGGAACTTCTTCTGGATTCTGCTTGCCACACTTTCATTAGCTGGACTGGGGATGGCTGGGAGTTTAAAATGTCAGATCCTGCAGAGGTGGCGAAGCGGTGGGGCCAGTGTAAGAACAAGCCCAAAATGAACTACGAGAAGCTAAGTCGTGGTCTGCGTTACTACTACCACAAAAACATCATTCACAAAACAGCAGGGAAGCGCTACGTCTACCGCTTTGTCTGTGATGTGCAAGGCATGCTTGGTAAAACGGCACACGAGGTCTTTGCAAGTCTAAACATCTCACCACCAAATGCAGCATCTCCACAGTCTGTAAGCACAACCAGACCGGAGGAAAACACAGAGTCCTGGGCACATTAGAGGAGAACATTTTCAAATGCCTGTAATGATTGAAAAGAACTGTAAAACCATCCCCTGGAAATAGTAACGACAAAGAAATGACTGACTGTTCCGTTCGAAGATATGTACTTTAAACTGATTTGGGTGAATGAGTGACAACAGATCTGAAATCAGCCATCAAATGCAGTAAGGTGCCTTTAGAAAACATTGTTAGCTACCTCTTTTGACGTTGGAACACTAATCTTGTAAATGTATTTTTTTTTCTTAAGTAAGTTGATGTCTTGACATCAGATTGTGAATTCTTGTAA

Function


symbol description
etv2 Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including cell surface receptor signaling pathway; positive regulation of endothelial cell differentiation; and positive regulation of macromolecule metabolic process. Predicted to be active in nucleus.

GO:

id name namespace
GO:0001570 vasculogenesis biological_process

KEGG:

id description
K02678 ETS1, pnt; C-ets-1

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000027_03771203_03774232.mRNA True 3196 mRNA 0.41 7 3769395 3774519
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Neighbor


gene id symbol gene type direction distance location
CI01000027_03744339_03748166 NA coding upstream 21229 3744339 ~ 3748166 (+)
CI01000027_03736903_03741917 NA coding upstream 26713 3736903 ~ 3742682 (+)
CI01000027_03718436_03732820 DYRK1A, DYRK1B, DYRK1A.2.S, DYRK1A.2 coding upstream 35625 3718436 ~ 3733770 (+)
CI01000027_03680285_03687497 ALKBH8 coding upstream 81879 3680285 ~ 3687516 (+)
CI01000027_03675758_03678539 FBL coding upstream 90746 3675758 ~ 3678649 (+)
CI01000027_03776983_03781753 NA coding downstream 1619 3776138 ~ 3781891 (+)
CI01000027_03783310_03784541 NA coding downstream 8403 3782922 ~ 3784541 (+)
CI01000027_03798333_03830899 GRAMD1A coding downstream 23425 3797944 ~ 3831143 (+)
CI01000027_03845911_03849635 NA coding downstream 71392 3845911 ~ 3849670 (+)
CI01000027_03851507_03856447 PSMC4.L, PRS6B, PSMC4 coding downstream 76988 3851507 ~ 3856517 (+)
G139002 NA non-coding upstream 25157 3744009 ~ 3744238 (+)
G138985 NA non-coding upstream 143787 3625313 ~ 3625608 (+)
CI01000027_03570192_03600805 CSPG5A non-coding upstream 169584 3570192 ~ 3600805 (+)
G138954 NA non-coding upstream 254722 3507522 ~ 3514673 (+)
G138918 NA non-coding upstream 271476 3492432 ~ 3497919 (+)
G138958 NA non-coding downstream 12836 3787355 ~ 3787850 (+)
G139016 NA non-coding downstream 49527 3824046 ~ 3824435 (+)
G139027 NA non-coding downstream 63686 3838205 ~ 3840442 (+)
G139023 NA non-coding downstream 90494 3865013 ~ 3865517 (+)
G140381 NA non-coding downstream 358319 4132838 ~ 4133069 (+)
G138953 NA other upstream 249330 3502072 ~ 3520065 (+)
G138915 NA other upstream 282748 3484387 ~ 3486647 (+)
G138515 NA other upstream 2092535 1664408 ~ 1676860 (+)
G138436 NA other upstream 2261579 1506961 ~ 1507816 (+)
G138290 NA other upstream 2770214 995970 ~ 999181 (+)
G140436 NA other downstream 962879 4737398 ~ 4774262 (+)
G140440 NA other downstream 1005898 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 1274404 5050310 ~ 5055755 (+)
CI01000027_05069310_05070638 NA other downstream 1294833 5067917 ~ 5070868 (+)
CI01000027_05071693_05072917 NA other downstream 1297543 5071693 ~ 5073136 (+)

Expression


CI01000027_03771203_03774232(ETV2) Expression in PRJCA010000

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
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CI01000027_03771203_03774232(ETV2) Expression in each Bioproject

Bar chart with 42 bars.
CI01000027_03771203_03774232(ETV2) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network


Homologous


species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010957 etv2 coding NC_007127.7 CM002900.2 42007090 ~ 42014272 (-)