CI01000027_03783310_03784541


Basic Information

Item Value
gene id CI01000027_03783310_03784541
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 3782922 ~ 3784541 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_03783310_03784541.mRNA
ACATAAAACATACCAATGTACACTCTCTTCTAACCCAGTGTCCTATATTTACAAGAAAGTGGTTTGGAAATGAGGCAGGAAATGTTTAGAGTAGGCTATAGGTCTAACGACAACACCTTCACCTCGGCTGAAAACATCGCGATGTAGGAGGGATCTTTCGCAGCGGTTCATTCTCCGCCTATATGTCAAAGCCTCTGGAAGCAAGTGCATGAAACTTTGAGGAACCATGCCGAAAACTATTAAGGATCACCTGGAGAATACCTTTGAGGATCTGGGGGAGGGAAATCTAAAAAAATTTAAAATTAAATTGCGCGATCGGAAGGAAGAACCGCGCATACGACAAGCTACAATTGAAAAAGTTAAAGACGCTCTAGATCTCGCTGATTTAATGGTGAACACTTTCACATTGAATGGCGCGGGTCCTGTAACACTCGAAATATTAGAGGTTATTAACTGTCATGAACTGGCAGCGGAGCTCAGAGAGAACATAGGAGACGCTCCAGTTGTTCCTGGACCTGGACCGGGGGCTCCATCTACTGAGCACTTCATCGATAAGAATCGGACAGAACTGATAGCACGAGTTAACAATATGGATGCCATCCTAGATGAACTTCATCAGAAGAAAGTCATCTCATTCGAGGATTACAGTAACATTCGTGCTGAGAAAACCAAACCGAATAAGATGAGAGAGTTATTAATGGGCCCAATTAACTCTGCTGGCACTAGAGGGAAAGATGCTTTATATCAAGCTCTCAAGAAGTCAGATCCCTTACTAGTTGAAGACCTTGAGTCTCAGAGAAAGTGA

Function

NR:

description
ASC

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_03783310_03784541.mRNA True 805 mRNA 0.43 3 3782922 3784541

Neighbor

gene id symbol gene type direction distance location
CI01000027_03776983_03781753 NA coding upstream 1031 3776138 ~ 3781891 (+)
CI01000027_03771203_03774232 ETV2 coding upstream 8403 3769395 ~ 3774519 (+)
CI01000027_03744339_03748166 NA coding upstream 34756 3744339 ~ 3748166 (+)
CI01000027_03736903_03741917 NA coding upstream 40240 3736903 ~ 3742682 (+)
CI01000027_03718436_03732820 DYRK1A, DYRK1B, DYRK1A.2.S, DYRK1A.2 coding upstream 49152 3718436 ~ 3733770 (+)
CI01000027_03798333_03830899 GRAMD1A coding downstream 13403 3797944 ~ 3831143 (+)
CI01000027_03845911_03849635 NA coding downstream 61370 3845911 ~ 3849670 (+)
CI01000027_03851507_03856447 PSMC4.L, PRS6B, PSMC4 coding downstream 66966 3851507 ~ 3856517 (+)
CI01000027_03863467_03864594 PSMC4 coding downstream 77955 3862496 ~ 3864877 (+)
CI01000027_03879680_03890591 NA coding downstream 94733 3879274 ~ 3891737 (+)
G139002 NA non-coding upstream 38684 3744009 ~ 3744238 (+)
G138985 NA non-coding upstream 157314 3625313 ~ 3625608 (+)
CI01000027_03570192_03600805 CSPG5A non-coding upstream 183111 3570192 ~ 3600805 (+)
G138954 NA non-coding upstream 268249 3507522 ~ 3514673 (+)
G138918 NA non-coding upstream 285003 3492432 ~ 3497919 (+)
G138958 NA non-coding downstream 2814 3787355 ~ 3787850 (+)
G139016 NA non-coding downstream 39505 3824046 ~ 3824435 (+)
G139027 NA non-coding downstream 53664 3838205 ~ 3840442 (+)
G139023 NA non-coding downstream 80472 3865013 ~ 3865517 (+)
G140381 NA non-coding downstream 348297 4132838 ~ 4133069 (+)
G138953 NA other upstream 262857 3502072 ~ 3520065 (+)
G138915 NA other upstream 296275 3484387 ~ 3486647 (+)
G138515 NA other upstream 2106062 1664408 ~ 1676860 (+)
G138436 NA other upstream 2275106 1506961 ~ 1507816 (+)
G138290 NA other upstream 2783741 995970 ~ 999181 (+)
G140436 NA other downstream 952857 4737398 ~ 4774262 (+)
G140440 NA other downstream 995876 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 1264382 5050310 ~ 5055755 (+)
CI01000027_05069310_05070638 NA other downstream 1284811 5067917 ~ 5070868 (+)
CI01000027_05071693_05072917 NA other downstream 1287521 5071693 ~ 5073136 (+)

Expression


Co-expression Network