CI01000027_04012798_04014351


Basic Information

Item Value
gene id CI01000027_04012798_04014351
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 4012747 ~ 4014351 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_04012798_04014351.mRNA
TTATATATTGTTCTGTTCTCATCCGCAGGCCTAACATGTTCAGAATGGACCATGCCAGTACAGCCTAAGGTCAACGGCTCTTTGGGACAGAACGTGATTCTCCCCTGCGCCTTCACGCACCCAAAACAAAATACATACACTGGTGTCATCCATGTCAAATGGATAAAGGACATCAAAAAAGAACTCATCTTTCACTGCACTCTGGACAACGGGACAAATAGCCAAGACAGTTGCACTAATCTAAAATCATCAGAGAGGTTCTCACTTAATGGTAACCCCAGGAAAGGAGACCTTTCCTTGCGTATCAGTAATTTAAAGTTTACCGATGCTGCACAGTACATCTGTAGGGTGGAGCTGGATTATAATCAACTTGGGAACCACACGGATCTTAATATCAACGCTCAGGCAAAAATCCTCATCCTGTCCCTGGATGTAGATGCCAAAGCTCACGTTGTGACGCTGAATTGCACTGCCCAAGGGAATCCGGTTCCAGAAGTGAAATGGACCTCCTCATCTGGACTGCTGGAAAATGGCACAATCAGAACTGACCTCAGAAGCTACTCCAGCTCAGTCACCAGCTCAGTTCCATTCTCTGACCAGGACGTGCACACTTGCCAAGCTGTGAACTCACTGGGCCAAGATCAGATAACGTTTCCACCAGATCATTCAAATTGTTCTTTTGGTCTGTTAGTAGTGACTTGTTTTCTGGGATGTTTGCTGTTTCTTGGGCTTGTAGCATTCGTTGTGAATGTGATAAAAAGAATAGTATCACATAGTATTAATACACATATCTTTAAAGGTTGTGAAGCTAGACAAGATGAAGGGTACTCAAAAGGGGTGTCACTAGAGGGGCGAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_04012798_04014351.mRNA True 858 mRNA 0.44 3 4012747 4014351

Neighbor

gene id symbol gene type direction distance location
CI01000027_03998691_04000730 RPP25L coding upstream 11913 3998168 ~ 4000834 (+)
CI01000027_03976548_03994948 NA coding upstream 17719 3975433 ~ 3995028 (+)
CI01000027_03941809_03967258 ATP2C1 coding upstream 45489 3941809 ~ 3967258 (+)
CI01000027_03907257_03920389 CEP85 coding upstream 91759 3907257 ~ 3920988 (+)
CI01000027_03879680_03890591 NA coding upstream 121010 3879274 ~ 3891737 (+)
CI01000027_04015806_04037491 NA coding downstream 1379 4015730 ~ 4038774 (+)
CI01000027_04054186_04103227 NA coding downstream 38687 4053038 ~ 4104420 (+)
CI01000027_04213570_04229519 PTPN23, PTPN23A coding downstream 198147 4212498 ~ 4229677 (+)
CI01000027_04350540_04357555 SHE coding downstream 335663 4350014 ~ 4358099 (+)
CI01000027_04381523_04393547 CHRNB2B coding downstream 367172 4381523 ~ 4394114 (+)
G139023 NA non-coding upstream 147230 3865013 ~ 3865517 (+)
G139027 NA non-coding upstream 172305 3838205 ~ 3840442 (+)
G139016 NA non-coding upstream 188312 3824046 ~ 3824435 (+)
G138958 NA non-coding upstream 224897 3787355 ~ 3787850 (+)
G139002 NA non-coding upstream 268509 3744009 ~ 3744238 (+)
G140381 NA non-coding downstream 118487 4132838 ~ 4133069 (+)
G140384 NA non-coding downstream 125588 4139939 ~ 4140428 (+)
G140386 NA non-coding downstream 132137 4146488 ~ 4146794 (+)
G140391 NA non-coding downstream 154058 4168409 ~ 4168635 (+)
G140392 NA non-coding downstream 155712 4170063 ~ 4174661 (+)
G138953 NA other upstream 492682 3502072 ~ 3520065 (+)
G138915 NA other upstream 526100 3484387 ~ 3486647 (+)
G138515 NA other upstream 2335887 1664408 ~ 1676860 (+)
G138436 NA other upstream 2504931 1506961 ~ 1507816 (+)
G138290 NA other upstream 3013566 995970 ~ 999181 (+)
G140436 NA other downstream 723047 4737398 ~ 4774262 (+)
G140440 NA other downstream 766066 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 1034572 5050310 ~ 5055755 (+)
CI01000027_05069310_05070638 NA other downstream 1055001 5067917 ~ 5070868 (+)
CI01000027_05071693_05072917 NA other downstream 1057711 5071693 ~ 5073136 (+)

Expression


Co-expression Network