CI01000027_04039778_04040714


Basic Information

Item Value
gene id CI01000027_04039778_04040714
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 4039109 ~ 4040714 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_04039778_04040714.mRNA
ATGGTCTCATGCACATCACTTGCTTTAATTGTTCACCCCCATCTGGACACTGAAGGAATCGCGTCTTTATACATGAAGGCTGATGTAAGCAGCTGTGCCAAAAACACCAAGAAAGGTACAATTTTAAAAGGAAAGTTAAAGAAAAGCAAATTGTTGCTTCGCTGCTTGTCATCAAACACAGAGCACCGAGAAGACATATGCTCCACACAAGAATTCGAGCTCCATCCTCAAGCTGCTGTGCAAATGAGGGAAAGTAAAGTACAGCGCGCTCATCTCGCGCCCCGGTCCCTCCCCTTCACGCGCTACAGAAGAATCTTTCGGCGGTTACGCCGACTTTAAGGGGAGGTACCACAGGTAAACACACTCGATTGTGCCCCTTCTCCTTAATTAAAATGTGCAATATATATATATATAGATATAGATATATATAGATATAGATATATATATAGGCTATACACACAAAACGGTATTTTCTAATGTGTTTCGGAATTATCCATTAAAGTTTTAAATATGCAAATTACGCATCCTCTTATGAAAATATCCCTGGTAAAACTGATTAAACCAGTCTAAAGAGGTGCTGGTCCTAGCTGCTGTCTCAGCTGATCTCTTCAAAAGTGCTCTAAAAACAAATCACCAAATCAGTTTTAAGACTTTTTTTTTTTCCAGCAAAAGATTTTTATGATAAAATGTCGCATAAAATGTGCCATAAGTAACACCACTCCGACTAAGATTGTGTGCTGATCTTAACTGGTTACTGCTGTCAGCCCACTCGTTTTAATAGGGGTTTGGGGAACTTTCAAACTGGCCAAACTGAGACATATAGGGCCTACTTTATGAGTAAAAAGTCACTTCAAAATGGCAGTAAACTTATGCAAAAATTCACAATTGTTATCCAACCAAAACCATAATTTATGGCTTTACAATGATGATCAACCTCAACTATTCGGTCATCTGTAGATGGTAACTTTTGCAGGCAGCGACATCTAGCGTTAGCTTTAGGGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_04039778_04040714.mRNA True 1008 mRNA 0.39 2 4039109 4040714

Neighbor

gene id symbol gene type direction distance location
CI01000027_04008272_04011121 NA coding downstream 26487 4008180 ~ 4012622 (-)
CI01000027_03969492_03973741 NA coding downstream 64933 3968698 ~ 3974176 (-)
CI01000027_03922380_03931033 NA coding downstream 108076 3922242 ~ 3931033 (-)
CI01000027_03898513_03905519 NA coding downstream 132615 3897266 ~ 3906494 (-)
CI01000027_03832200_03836030 NA coding downstream 202579 3831205 ~ 3836530 (-)
CI01000027_04156256_04198063 NEK11 coding upstream 115542 4156256 ~ 4198063 (-)
CI01000027_04206424_04209369 NA coding upstream 164896 4205610 ~ 4209445 (-)
CI01000027_04233680_04249553 SCAP coding upstream 192928 4233642 ~ 4249553 (-)
CI01000027_04254645_04264857 NA coding upstream 213453 4254167 ~ 4264857 (-)
CI01000027_04324807_04339354 NA coding upstream 283962 4324676 ~ 4339354 (-)
G140308 NA non-coding downstream 2229 3998688 ~ 4036880 (-)
G140268 NA non-coding downstream 169238 3869467 ~ 3869871 (-)
G140267 NA non-coding downstream 189467 3849360 ~ 3849642 (-)
G140237 NA non-coding downstream 214671 3823904 ~ 3824438 (-)
G140262 NA non-coding downstream 233680 3802715 ~ 3805429 (-)
G140363 NA non-coding upstream 66189 4106903 ~ 4107518 (-)
G140370 NA non-coding upstream 71882 4112596 ~ 4112829 (-)
G141402 NA non-coding upstream 79606 4120320 ~ 4120527 (-)
G141405 NA non-coding upstream 81607 4122321 ~ 4123420 (-)
G141421 NA non-coding upstream 117640 4158354 ~ 4158602 (-)
CI01000027_03787377_03788902 NA other downstream 249887 3787377 ~ 3790279 (-)
G140118 NA other downstream 454430 3509352 ~ 3584679 (-)
CI01000027_02226447_02227499 NA other downstream 1811084 2225781 ~ 2227499 (-)
CI01000027_02119227_02124423 NA other downstream 1913081 2119131 ~ 2125142 (-)
G141481 NA other upstream 331533 4372247 ~ 4412810 (-)
G141488 NA other upstream 466761 4507475 ~ 4508971 (-)
G141728 NA other upstream 836353 4877067 ~ 4877766 (-)
G141588 NA other upstream 1067621 5108335 ~ 5201155 (-)
CI01000027_05447458_05450346 PON2, PON3.2, PON3.1 other upstream 1408612 5447424 ~ 5450461 (-)

Expression


Co-expression Network