CI01000027_04497623_04499224



Basic Information


Item Value
gene id CI01000027_04497623_04499224
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 4497623 ~ 4499348 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000027_04497623_04499224.mRNA
ATGGCCGGACCTTTGAAACTTATCACATGGAACACTTGTGGAATTAGAGACACTGCTGATGTCCAACAGAAAAAAGAAATGATTTGTCAGTGGCTGAATGAACAACAAGCATCTGTTGCATTTCTTCAAGAGACACATATAGGTATCAATAACGTTAAACATGTTGAAGACATTCATGGTTGGAAAGCATTTTATAGTGTTCATCATCCACGTAGCAAAGGTGTTGCAATATTGATAAAAAATGATTTGCCTTTTGAGTATATAAAACATGACATGGACCCCACAGGCAGCTACATTGTACTCATTTGCAAATTATACAGTAAATGCTTCACTCTAGTTAATGTATACAACCATGCAGATGAACACAAGGTGTTGCAGTGTCTTTCTGAATATCTATATCAGACTGCCAAAGGTGTCTTGATAGTTGCAGGGGATTTCAATACTGTTCTAAACCCAGATCTTGACCGGGAGTATCCAACAGGAAATACAGAGCCCCTTAGACCTTATCTCGAGGATTTCATCTCATCTTTAATGCTTGTAGACATCTGGGGACAAAACAATCCTTATGAGAGAGATTCATTCACTCGTTTTCCGTGGAAAATATCCAAACAGCAAATCAAAAAAACACCAGGTCAGAAGAAAACGAAGAGGAGGGGTGCATCAAGACTAGACATGGTCTTCATGCAGCGGAATGAACTGTGGCTTGCTGAGAGCTGTGAAATCCCCAAGGTTCCAAGGCATAATATATCAGATCACCACCCTGTAGTTCTGAGTCTGTGTTTGCCAAAACCAAATAACACCACAACAGTTCTCTCAAATGACCCGACAGCATGTTCCAGTGGCATAAAGAATATGGTCATTGAAAAGAGGCCTTATAAGAGGATACCAGGTGAAATTAGTGAAGCTGAAGTTTTGAAAGCGTTAATGTCGCTTGTAGAATATGAAACCCCACTTGGGGAAAATGTGCAAACAATTAAGATTAACAAAGAGCAAAAATCACAAGAACTTAAAGAGCTTTTTAACACAATGATTAGAGGAGGAATTCCTAAGGGCTTCACTGACAGTGTGAAAGAAAACGGAAGGTACTACTTTAGAGCAGAGTACATGATACTTGCCACAATACTTCTTAGGCGAATGGAAAAATTTCTTCAGCCCTCATTCAAAAGCAAACCAATGAAAATGAGCTGCAAACTCTTCATCATTGTTAGCTTTCGCAGCACGCCCAAAAAAATCAAAAGAGATTATTTAAGACAAGCTTTAAAATCACTGAAGCGCATCCATCCATCGCCCCCACGCGATTTCAAGATTTTGGAAAAGCTGCTTCCAAGCACTGGCCAATATAAAGAGCTTAGAGAAGGCTGCCCACTTACACCAACTCTTCTGACAATGGCTCTGAAACACCTAGCCTGTGCCTTAAAGAACGATTTGAAAGAATCTGTGGTTGATGTGTGCCATCATAGAAAATGCATTACCATCTACATGAATACTGTCCAGTATCACATTCTAAATCAAAACATTAACAAATTTCAATTGCAATCAGGGATTTCTCTTTTACCAAAAGTAGGACAGGTTTGGAAAAGGAGAAGGAATTCAAACTCATAAAAGGCTATATCTGTGAGTAATGTTGTGCATGAAACATGCATGACAATTTAAGGTCCAGAACGGGAATGGTGTAGAGACGAAACATAGGATGGATGATTAGGATGCAAATTATTTCCTCAAATTA

Function


NR:

description
reverse transcriptase

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000027_04497623_04499224.mRNA True 1726 mRNA 0.39 1 4497623 4499348

Neighbor


gene id symbol gene type direction distance location
CI01000027_04488278_04495470 FLAD1 coding upstream 1546 4488278 ~ 4496077 (+)
CI01000027_04485614_04488056 NA coding upstream 9567 4483891 ~ 4488056 (+)
CI01000027_04470309_04483532 NA coding upstream 14064 4470145 ~ 4483559 (+)
CI01000027_04381523_04393547 CHRNB2B coding upstream 103509 4381523 ~ 4394114 (+)
CI01000027_04350540_04357555 SHE coding upstream 139524 4350014 ~ 4358099 (+)
CI01000027_04537765_04549872 NA coding downstream 37994 4537342 ~ 4549929 (+)
CI01000027_04551022_04551875 NA coding downstream 51364 4550712 ~ 4551993 (+)
CI01000027_04655825_04667764 NA coding downstream 155435 4654783 ~ 4667867 (+)
CI01000027_04713891_04717190 NA coding downstream 214432 4713780 ~ 4717359 (+)
CI01000027_04725469_04727486 EFNA1B coding downstream 224545 4723893 ~ 4728283 (+)
G140465 NA non-coding upstream 66930 4428037 ~ 4430693 (+)
G140495 NA non-coding upstream 83047 4414354 ~ 4414576 (+)
G140447 NA non-coding upstream 84554 4404326 ~ 4413069 (+)
G140490 NA non-coding upstream 94535 4401489 ~ 4403088 (+)
G140489 NA non-coding upstream 135366 4362049 ~ 4362257 (+)
G140509 NA non-coding downstream 5506 4504854 ~ 4505152 (+)
G140512 NA non-coding downstream 14062 4513410 ~ 4513585 (+)
G140522 NA non-coding downstream 171759 4671107 ~ 4671477 (+)
G140587 NA non-coding downstream 192786 4692134 ~ 4692704 (+)
G140596 NA non-coding downstream 208877 4708225 ~ 4708506 (+)
G138953 NA other upstream 977558 3502072 ~ 3520065 (+)
G138915 NA other upstream 1010976 3484387 ~ 3486647 (+)
G138515 NA other upstream 2820763 1664408 ~ 1676860 (+)
G138436 NA other upstream 2989807 1506961 ~ 1507816 (+)
G138290 NA other upstream 3498442 995970 ~ 999181 (+)
G140436 NA other downstream 238050 4737398 ~ 4774262 (+)
G140440 NA other downstream 281069 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 549575 5050310 ~ 5055755 (+)
CI01000027_05069310_05070638 NA other downstream 570004 5067917 ~ 5070868 (+)
CI01000027_05071693_05072917 NA other downstream 572714 5071693 ~ 5073136 (+)

Expression



Co-expression Network