CI01000027_04537765_04549872


Basic Information

Item Value
gene id CI01000027_04537765_04549872
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 4537342 ~ 4549929 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_04537765_04549872.mRNA
TTATAAAAGAGAATAATTAAAATACGAACAATTTCACAACCACGGTGGAGGAATACAGAGCAGCCTCGACAAGGCGCGCATACCAAATGAGCTACGCAATCTCGCTTCAGTCTTACTGTACGCCACAACATAATTGCTAAATGGACCCGATAATTGATCAACAATGCTAGGCTATACACAGAAAAACACAAAAACATGCTGGGAAAGGAAAGGGAGGTGTGAGGGGTCGGAGCGTGTGAACTGATTGGCTCCTCAAGCTTCATGACTGGTGAAGGTGTGATTTGGGGGTCCTGATGGACTTGGAACCTTGTAAGAACTCTGAAACCAACCAACGAGGAAAAGGGCATATTTATGTGGTGCTGCCTTAGGGCAACCAGCAGTAGGGTTATCTGAGGAGCTTTGATAAGAGAATGCCAAAAATACATGAAGACAGGGACTTGGAAAGTTTTGAGAAGACAATATGTAGAGCGAAGACTGGAACTGAGAGAAAGAGAAAAAGTTGTTGTGTTATTGGAATGTTGGAGGATTTGGTTGAAGGGTGCAAAGGACTCAAGGTCTCGTTCCCCCCCTCTATTTCCTAAAAGTGTTGGGAAGCAGGATCCAAACCCTTTGTTAATGGATGTTATTCCAAAGTCTAGTGGAGGAAACGCGCGCACACACGCAAAAACAAACAGAACTCCTGACCTTAAGCTTCCTTTTTGGTGCCAACATTTTGCGTTGCTCTTTCTATCTCTCCAAAGGCGCCAGGCCCAGCTGTCGTCGGTAAGTGGGTTAGGGCAAGCAGCCACCCGAGTTACATGCTCCAGTGTTCAACCTCGCTCCGCGCTGAAAAGGGCGCCTGCTAAGCAAATAAGCAATAACGATAAATCTGAGCTGGCTTTGGGCATCCATCATTGCAAAAGGCATGAAAGAGTGCTGGTGCTTGGCAGCCTTGAGCTTTGTGGTGCGGTGGCCAGGCGGAGAGCCCGAGGAGAGCCAAGCACCTCTGAACATGATCAGGTCACAAAGGCCTCAGCCGCACAAAGAGCAGAACTCGCTCCATACAAAAAGCCGCATCCACGGCCTGCATTAGGCACACATAGTACAAAAGGCTCAAAAACACCCCAAACAAAACCCAAGAACCCAAACCACACATTAGTCTTCTGTAACACAAAAGAAAAACTGAAAACAATTAACAAAAAAGGCAAAGCATTATCTTAAGATCTGATAAAAGCTCTGAAATAAGTTGAACAATAAGCAGAATTTAAATTACAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_04537765_04549872.mRNA True 1257 mRNA 0.45 4 4537342 4549929

Neighbor

gene id symbol gene type direction distance location
CI01000027_04497623_04499224 NA coding upstream 37994 4497623 ~ 4499348 (+)
CI01000027_04488278_04495470 FLAD1 coding upstream 41265 4488278 ~ 4496077 (+)
CI01000027_04485614_04488056 NA coding upstream 49286 4483891 ~ 4488056 (+)
CI01000027_04470309_04483532 NA coding upstream 53783 4470145 ~ 4483559 (+)
CI01000027_04381523_04393547 CHRNB2B coding upstream 143228 4381523 ~ 4394114 (+)
CI01000027_04551022_04551875 NA coding downstream 783 4550712 ~ 4551993 (+)
CI01000027_04655825_04667764 NA coding downstream 104854 4654783 ~ 4667867 (+)
CI01000027_04713891_04717190 NA coding downstream 163851 4713780 ~ 4717359 (+)
CI01000027_04725469_04727486 EFNA1B coding downstream 173964 4723893 ~ 4728283 (+)
CI01000027_04768212_04770488 KRTCAP2 coding downstream 218283 4768212 ~ 4770687 (+)
G140512 NA non-coding upstream 23757 4513410 ~ 4513585 (+)
G140509 NA non-coding upstream 32190 4504854 ~ 4505152 (+)
G140465 NA non-coding upstream 106649 4428037 ~ 4430693 (+)
G140495 NA non-coding upstream 122766 4414354 ~ 4414576 (+)
G140447 NA non-coding upstream 124273 4404326 ~ 4413069 (+)
G140522 NA non-coding downstream 121178 4671107 ~ 4671477 (+)
G140587 NA non-coding downstream 142205 4692134 ~ 4692704 (+)
G140596 NA non-coding downstream 158296 4708225 ~ 4708506 (+)
G140597 NA non-coding downstream 158859 4708788 ~ 4708995 (+)
G140455 NA non-coding downstream 183779 4733708 ~ 4736668 (+)
G138953 NA other upstream 1017277 3502072 ~ 3520065 (+)
G138915 NA other upstream 1050695 3484387 ~ 3486647 (+)
G138515 NA other upstream 2860482 1664408 ~ 1676860 (+)
G138436 NA other upstream 3029526 1506961 ~ 1507816 (+)
G138290 NA other upstream 3538161 995970 ~ 999181 (+)
G140436 NA other downstream 187469 4737398 ~ 4774262 (+)
G140440 NA other downstream 230488 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 498994 5050310 ~ 5055755 (+)
CI01000027_05069310_05070638 NA other downstream 519423 5067917 ~ 5070868 (+)
CI01000027_05071693_05072917 NA other downstream 522133 5071693 ~ 5073136 (+)

Expression


Co-expression Network